Publication date
September 2023
DOIAbstract
Differential isoform expression now optional Fix bugs introduced in 2.0.1 in which .xlsx and .csv metadata input was broken. Fix for karyotype plotting noteboo
Differential isoform expression now optional Fix bugs introduced in 2.0.1 in which .xlsx and .csv metadata input was broken. Fix for karyotype plotting noteboo
RNA sequencing has become the standard technique for high resolution genome-wide monitoring of gene ...
rna-seq-pop v2 is released!! The major change in version 2, is that we now use papermill and Jupyter...
The focus of this project has been the creation of a visualization program to flexibly and dynamical...
VariantsOfInterest - fixed a bug which removes NAs from mean frequency calculation ...
v1.0.0 is released, to coincide with the bioRxiv preprint. We add support for variant calling with o...
Motivation: As sequencing technologies improve their capacity to detect distinct transcripts of the ...
Support for single-end reads in #57 added venn #54 and custom gene list heatmaps #53 Renamed resul...
deseq_init rule now outputs normalized counts as well (@jafors). Updated software versions (@lparson...
Title An R package for gene and isoform differential expression analysis of RNA-seq data Version 1.4...
Extensive differential splicing analysis using IsoformSwitchAnalyzeR. Added ability to choose the st...
This new release fix a few issues and adds a new functionality: fix issue with the mapping_summary....
Major changes: Normalization options Added support for multiple file formats (bigWig and (tabix-in...
What's Changed Fix options not used in star_mapping by @cokelaer in https://github.com/sequana/rnas...
A bug leading to a crash with custom representative transcript handling has been fixed. Differential...
Extended caption on p-value histograms and empty data fix for fgsea (@dlaehnemann)
RNA sequencing has become the standard technique for high resolution genome-wide monitoring of gene ...
rna-seq-pop v2 is released!! The major change in version 2, is that we now use papermill and Jupyter...
The focus of this project has been the creation of a visualization program to flexibly and dynamical...
VariantsOfInterest - fixed a bug which removes NAs from mean frequency calculation ...
v1.0.0 is released, to coincide with the bioRxiv preprint. We add support for variant calling with o...
Motivation: As sequencing technologies improve their capacity to detect distinct transcripts of the ...
Support for single-end reads in #57 added venn #54 and custom gene list heatmaps #53 Renamed resul...
deseq_init rule now outputs normalized counts as well (@jafors). Updated software versions (@lparson...
Title An R package for gene and isoform differential expression analysis of RNA-seq data Version 1.4...
Extensive differential splicing analysis using IsoformSwitchAnalyzeR. Added ability to choose the st...
This new release fix a few issues and adds a new functionality: fix issue with the mapping_summary....
Major changes: Normalization options Added support for multiple file formats (bigWig and (tabix-in...
What's Changed Fix options not used in star_mapping by @cokelaer in https://github.com/sequana/rnas...
A bug leading to a crash with custom representative transcript handling has been fixed. Differential...
Extended caption on p-value histograms and empty data fix for fgsea (@dlaehnemann)
RNA sequencing has become the standard technique for high resolution genome-wide monitoring of gene ...
rna-seq-pop v2 is released!! The major change in version 2, is that we now use papermill and Jupyter...
The focus of this project has been the creation of a visualization program to flexibly and dynamical...
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