bactopia/bactopia: Multiple accessions, endpoint fixes, bugs

Robert A. Petit III
Finlay Maguire
Thomas Gotwig

Publication date

August 2020

DOI

Abstract

v1.4.9 bactopia/bactopia "Toreador's Ring" - 2020/08/23 Added Support for multiple accession bactopia search (SRA) Bactopia Tools: fastani, mashtree, pirate, roary (Assembly) Fixed Undefined variable in mapping_query.sh ENA API endpoint for bactopia search Updated GTDB-TK to 1.3.0 to support latest downloads FastANI tool merge_results in no longer a separate step ANI is now one-to-many calculations --reassemble misapplie

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bactopia/bactopia: Multiple accessions, endpoint fixes, bugs

Abstract

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bactopia/bactopia: Multiple accessions, endpoint fixes, bugs

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