ECP-WarpX/WarpX: 21.09

Dependencies AMReX: release 21.09 PICSAR (development, incl. QED): c16b642e3dcf860480dd1dd21cefa3874f395773 picmistandard: release 0.0.14 openPMD-api: releases 0.14.2-0.14.* List of PRs merged since the last release This list was generated with git log 21.08.. | grep -A 3 "Author: " | grep -B 1 "\-\-" | sed '/--/d' | sed -e 's/^ /- /' Release 21.09 (#2270) Bug fix in call to RhoFunctor for RZ modes (#2271) silence unused params errors in FlushFormatSensei (#2265) [mini-PR] Improved doc on fwd headers (#2267) Docs: Perlmutter Aug 30th Update (#2262) Docs: Summit umask (Permissions) (#2260) Initializing geometric data also with the CKC solver (#2254) Add link to repo visual structure (#2256) Add profiling for charge deposition (#2253) Added parsing in intervals (#2246) Glossary: OTP/2FA (#2251) Docs: ADIOS2 Fixed on Summit (#2239) Docs: Perlmutter (#2229) Make buffer of scraped particles available to Python code (#2164) AMReX/PICSAR: Weekly Update (#2249) CI: Rename Travis -> CI (#2250) ECT conformal solver (#1923) CI: Trap NaNs, Divisions by Zero, Overflows (#2205) Fix EB: CUDA Lambda Visibility (#2247) Ascent: Include for Profiler (#2238) Functionality to save particle positions from the previous step (#2206) Use ROCm 4.3 in CI (#2240) Improvement in electrostic field solve when using EB & a small refactoring of the Electrostatic solver (#2143) Laser-Ion Example: Fix Histogram Functs (#2232) Particle Unit Conversion: Generalize (#2223) add include to fix compiler error (#2237) Update AMReX: Parser, SENSEI (#2236) Fix SENSEI & Ascent component in AMReX.cmake (#2235) Multi-J: Optimize Allocations of rho MultiFabs (#2224) GetPosition 2D3V: y=0 (#2233) rearranging the loops (#2231) Avoid Unnecessary FFTs of rho (#2234) Fix: Missing Include Guards (FWD) (#2226) Alphabetized and added PR to glossary (#2228) WarpXComm.cpp: Fix Bug (Uninitialized MultiFabs) (#2230) Docs: Fix Summit Python (#2227) Avoid an NaN in collision module (#2225) Use the function SyncRho and the array rho_fp in the Electrostatic solver (#1811) Enable restart with PSATD (#1367) Ascent/SENSEI: Add Profiler (#2204) Check for unused WarpX environment variables when compiling (#2208) Scalar field interpolator from grid to particle position (#2221) AMReX/PICSAR: Weekly Update (#2222) No particle resorting when no species (#2136) Docs: Cori PICMI Instructions (#2219) Evolve: Reorder py_afterstep and cur_time break (#2213) Added transform of fields from lab to boosted frame (#2201) Allow Silver-Mueller boundary conditions to only be applied in certain directions (#2220) Docs: OLCF ADIOS2 Currently Broken Updated the installation instructions (#2218) Particle boundary scrape (#2124) Improved error handling when the libwarpx shared object library can't be loaded (#2215) Docs: Summit with RHEL8 (#2216) Add plot_raw_rho in parameters doc (#2212) Ionization.H: Fix Bug (Division by Zero) (#2214) Implemented the parsing of integer input parameters (#2138) Bug fixed: looping over all species now within OneStep_multiJ (#2207) Rho Diags: Do Not Allocate rho_fp/cp, Remove plot_rho, setplot_rho (#2203) update use-sensei flag (#2192) openPMD-api: 0.14.2 (#2150) CI: Cancel Prev. GH Action on Push (#2202) Minor fix to the documentation of the plasma lens (#2200) Update Scripts: .ini file (#2191) Use less guard cells in ParallelCopy of refined level's UpdateAuxilaryData (#2144) Multi-J (Hybrid): Fix Bug with Current Centering (#2181) do_pml should not be parsed anymore. (#2183) AMReX/PICSAR: Weekly Update (#2199) Docs: Summit Ascent Moved (#2195) Fixed issue where GPU runs would continually print 're-sorting particles' even with verbose turned off (#2197) Docs: Fix Cori URL (404) (#2194) Implemented new style BTD in picmi (#2187) WarpX::Version: Not Empty (#2193) For plasma lens, mapped particle to lab frame (#2190) Fix GetIteration (#2189) Docs: Turner Example Calibration Data (#2185) Work-Around: ROCm/rocFFT <=4.3.0 (#2180) [mini-PR] Radiation Reaction : fix issue in single precision (#2186) Updated documentation for the plasma lens (#2182) AMReX/PICSAR: Weekly Update (#2184) CI: Cover Performance Tests (#2179) Fix: Performance Tests (Boundary) (#2178) fix typo (#2175) EB: RZ Warnings (#2176) ES Solver: Fix SP Build (#2174) make parameter less prone to numerical issues in single precision (#2173) More cleanup of particle boundaries (#2171) In add_particles, used None for input parameter values (#2169) Moved some routines to .cpp file (#2168) Shift parsing of physical/mathematical constants from hard-coding to table lookup (#2128) RZ PSATD: Time Averaging for Multi-J Algorithm (#2141) Add particle weight as an explicit argument for _libwarpx.py::add_particles() (#2161) Fixed bug where specifying write_dir for particle diagnostic did not work (#2167) Added B field to plasma lens (#2163) BinaryCollision: use more general particle data structure (#2137) PEC Analysis: Remove Unused Imports (#2165) openPMD: Missing Include (#2162) openPMD: Use Steps if != BTD (#2157) openPMD: Style Cleaning (Dec/Def) (#2160