This release contains breaking changes that may require code updates. What's Changed For consistency and ease of use, the ElectronCountedData namedtuple has been replaced by the SparseArray class. The SparseArray has similar attributes as the ElectronCountedData, but scan_dimensions is now scan_shape[::-1], and frame_dimensions is now frame_shape. Here are the functions that are effected: stempy.image.electron_count() now returns a SparseArray instead of the namedtuple stempy.io.load_electron_counts() now also returns a SparseArray stempy.io.save_electron_counts() now requires a SparseArray argument instead of the namedtuple SparseArray now also supports attaching metadata. This metadata will be included in any of the HDF5 files writ...
What's Changed Remove opencv dependency by @constantinpape in https://github.com/computational-cell...
breaking changes renamed global_geometry.dA_K2 and node.scaled_curvature_energy to unit_bending_ene...
Many changes to the API have occured since v.0.2. Here a (incomplete) summary of the main changes: ...
What's Changed The data format used by SparseArray and electron counting methods changes. This simp...
What's Changed Skip python 3.11 wheels by @psavery in https://github.com/OpenChemistry/stempy/pull/...
What's Changed Remove references to <= 3.6 ( no longer supported by cibw ) by @cjh1 in https://gith...
What's Changed Add analysis functions by @ercius in https://github.com/OpenChemistry/stempy/pull/27...
This release improves electron counting with a new multi-pass approach the reduce memory usage and m...
What's Changed Sparse array advanced indexing by @psavery in https://github.com/OpenChemistry/stemp...
What's Changed Add implementation for summing along frame axes by @psavery in https://github.com/Op...
What's Changed Updates for new scipy-notebook image by @cjh1 in https://github.com/OpenChemistry/st...
Added new sparse matrix format: sliced ELLPACK (sell) 4th-order Runge-Kutta is now available as nume...
Enabled reading a tabular data-file Lots of updates to the spin-class. It should now be more cohere...
What's Changed Drop bind generics by @stemangiola in https://github.com/stemangiola/tidybulk/pull/2...
This is a micro release that contains bug fixes, QoL improvements and new features. Note the API is ...
What's Changed Remove opencv dependency by @constantinpape in https://github.com/computational-cell...
breaking changes renamed global_geometry.dA_K2 and node.scaled_curvature_energy to unit_bending_ene...
Many changes to the API have occured since v.0.2. Here a (incomplete) summary of the main changes: ...
What's Changed The data format used by SparseArray and electron counting methods changes. This simp...
What's Changed Skip python 3.11 wheels by @psavery in https://github.com/OpenChemistry/stempy/pull/...
What's Changed Remove references to <= 3.6 ( no longer supported by cibw ) by @cjh1 in https://gith...
What's Changed Add analysis functions by @ercius in https://github.com/OpenChemistry/stempy/pull/27...
This release improves electron counting with a new multi-pass approach the reduce memory usage and m...
What's Changed Sparse array advanced indexing by @psavery in https://github.com/OpenChemistry/stemp...
What's Changed Add implementation for summing along frame axes by @psavery in https://github.com/Op...
What's Changed Updates for new scipy-notebook image by @cjh1 in https://github.com/OpenChemistry/st...
Added new sparse matrix format: sliced ELLPACK (sell) 4th-order Runge-Kutta is now available as nume...
Enabled reading a tabular data-file Lots of updates to the spin-class. It should now be more cohere...
What's Changed Drop bind generics by @stemangiola in https://github.com/stemangiola/tidybulk/pull/2...
This is a micro release that contains bug fixes, QoL improvements and new features. Note the API is ...
What's Changed Remove opencv dependency by @constantinpape in https://github.com/computational-cell...
breaking changes renamed global_geometry.dA_K2 and node.scaled_curvature_energy to unit_bending_ene...
Many changes to the API have occured since v.0.2. Here a (incomplete) summary of the main changes: ...