These DADA2-formatted training fasta files were derived from the Silva Project's version 128 release. They are available under the Silva dual-licensing model for academia and commercial users: https://www.arb-silva.de/silva-license-information/ These fastas were generated by the following commands (using the dada2 R package version 1.5.1): path <- "~/Desktop/Silva/Silva.nr_v128" dada2:::makeTaxonomyFasta_Silva(file.path(path, "silva.nr_v128.align"), file.path(path, "silva.nr_v128.tax"), "~/tax/silva_nr_v128_train_set.fa.gz") dada2:::makeSpeciesFasta_Silva("~/Desktop/Silva/SILVA_128_SSURef_tax_silva.fasta.gz", "~/tax/silva_species_assignment_v128.fa.gz")These files are derived from the Silva database, and their use is subject to the Silv...
This is the Silva123 taxonomy reformatted to work with eukaryote sequences for dada2: SILVA_123_dad...
SILVA (lat. forest) is a comprehensive web resource, providing services around up to date, high-qual...
Modified version (blastn ready) of the file SILVA_138.1_SSURef_NR99_tax_silva_trunc.fasta.gz for NGS...
These DADA2-formatted training fasta files were derived from the Silva Project's version 132 release...
<p>These DADA2-formatted training fasta files were derived from the Silva Project's version 128 rele...
These DADA2-formatted training fasta files were derived from the Silva Project's version 138 release...
These DADA2-formatted training fastas were derived from Silva version 123. They are available under ...
These training fasta files are derived from the Silva Project's version 138.1 release and formatted ...
These training fasta files are derived from the Silva 138.1 prokaryotic SSU taxonomic training data ...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
<p>These DADA2-formatted training fastas were derived from the Ribosomal Database Project (RDP Train...
These are species-level taxonomy classification training sets for the assignTaxonomy function from t...
I used a machine with Ubuntu 16.04 and DADA2 (vsn 1.5.2) to coax the Ribosomal Database Project's Tr...
Customized silva sequences file for DADA2 taxonomy assignment. Sequences from glacier samples were a...
This is the Silva123 taxonomy reformatted to work with eukaryote sequences for dada2: SILVA_123_dad...
SILVA (lat. forest) is a comprehensive web resource, providing services around up to date, high-qual...
Modified version (blastn ready) of the file SILVA_138.1_SSURef_NR99_tax_silva_trunc.fasta.gz for NGS...
These DADA2-formatted training fasta files were derived from the Silva Project's version 132 release...
<p>These DADA2-formatted training fasta files were derived from the Silva Project's version 128 rele...
These DADA2-formatted training fasta files were derived from the Silva Project's version 138 release...
These DADA2-formatted training fastas were derived from Silva version 123. They are available under ...
These training fasta files are derived from the Silva Project's version 138.1 release and formatted ...
These training fasta files are derived from the Silva 138.1 prokaryotic SSU taxonomic training data ...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
<p>These DADA2-formatted training fastas were derived from the Ribosomal Database Project (RDP Train...
These are species-level taxonomy classification training sets for the assignTaxonomy function from t...
I used a machine with Ubuntu 16.04 and DADA2 (vsn 1.5.2) to coax the Ribosomal Database Project's Tr...
Customized silva sequences file for DADA2 taxonomy assignment. Sequences from glacier samples were a...
This is the Silva123 taxonomy reformatted to work with eukaryote sequences for dada2: SILVA_123_dad...
SILVA (lat. forest) is a comprehensive web resource, providing services around up to date, high-qual...
Modified version (blastn ready) of the file SILVA_138.1_SSURef_NR99_tax_silva_trunc.fasta.gz for NGS...