Added [#94] - Added a second BEDTools intersect step to allow filtering and overlapping in the same workflow. [#101] - Initialized nf-test Changed [#103] - Updated Modules Fixed [841ae62] - Updated PINTS version from 1.1.6 to 1.1.8 (Fixes an issue where PINTS fails if one of the predictions was empty) [#97] - Add HOMER channels to fix error about "Missing workflow output parameter: homer_peaks" when homer is skipped Add missing DOIs (@apeltzer
Full changelog: https://github.com/nf-core/tools/compare/2.4.1...2.5 Template Bumped Python version...
v2.0 - Palladium Platypus - [2021-07-13] :warning: Major enhancements & breaking changes This marks ...
[3.1] - 2023-03-10 Major Changes IgG controls will now be analysed by the deeptools QC subworkflow ...
[1.1.0] - 2019-11-05 Added #46 - Missing gene_bed path in igenomes config Update template to tools ...
Added #63 Replace local bcl_demultiplex subworkflow with nf-core version (@matthdsm) #63 Add bases_...
[1.1.0] - 2019-11-05 Added #35 - Add deepTools plotFingerprint #46 - Missing gene_bed path in igeno...
Template Fixed an issue regarding explicit disabling of unused container engines [#972] Removed tra...
v1.1.1 - [2023-05-24] Added #270 Merged pipeline template of nf-core/tools version 2.8 and updated ...
v1.1.3 - [2023-08-11] Added #290 Merged pipeline template of nf-core/tools version 2.9, updated ref...
Added #206 Updated the workflow picture Adjustments of the PRE_QUANTIFICATION subworkflow: OPENMS_F...
This is a patch release fixing some nasty bugs that crept into the code base for the nf-core helper ...
[1.2.0] - 2020-07-02 Added #63 - Added multicore support for Trim Galore! #75 - Include gene annota...
Added Additional output from CometAdapter (generated with the parameter --pin_out) Folder structure...
Added #250 Back to dev. #256 Merge template updates to nf-core tools 2.8. #263 Bump versions to 3.1...
Bug fix The UCSC_BEDGRAPHTOBIGWIG process now uses the ucsc-bedgraphtobigwig container The full-siz...
Full changelog: https://github.com/nf-core/tools/compare/2.4.1...2.5 Template Bumped Python version...
v2.0 - Palladium Platypus - [2021-07-13] :warning: Major enhancements & breaking changes This marks ...
[3.1] - 2023-03-10 Major Changes IgG controls will now be analysed by the deeptools QC subworkflow ...
[1.1.0] - 2019-11-05 Added #46 - Missing gene_bed path in igenomes config Update template to tools ...
Added #63 Replace local bcl_demultiplex subworkflow with nf-core version (@matthdsm) #63 Add bases_...
[1.1.0] - 2019-11-05 Added #35 - Add deepTools plotFingerprint #46 - Missing gene_bed path in igeno...
Template Fixed an issue regarding explicit disabling of unused container engines [#972] Removed tra...
v1.1.1 - [2023-05-24] Added #270 Merged pipeline template of nf-core/tools version 2.8 and updated ...
v1.1.3 - [2023-08-11] Added #290 Merged pipeline template of nf-core/tools version 2.9, updated ref...
Added #206 Updated the workflow picture Adjustments of the PRE_QUANTIFICATION subworkflow: OPENMS_F...
This is a patch release fixing some nasty bugs that crept into the code base for the nf-core helper ...
[1.2.0] - 2020-07-02 Added #63 - Added multicore support for Trim Galore! #75 - Include gene annota...
Added Additional output from CometAdapter (generated with the parameter --pin_out) Folder structure...
Added #250 Back to dev. #256 Merge template updates to nf-core tools 2.8. #263 Bump versions to 3.1...
Bug fix The UCSC_BEDGRAPHTOBIGWIG process now uses the ucsc-bedgraphtobigwig container The full-siz...
Full changelog: https://github.com/nf-core/tools/compare/2.4.1...2.5 Template Bumped Python version...
v2.0 - Palladium Platypus - [2021-07-13] :warning: Major enhancements & breaking changes This marks ...
[3.1] - 2023-03-10 Major Changes IgG controls will now be analysed by the deeptools QC subworkflow ...