Swarm version 2.1.10 fixes two bugs related to gap penalties of alignments. The first bug may lead to wrong alignments and similarity percentages reported in UCLUST (.uc) files. The second bug makes Swarm use a slightly higher gap extension penalty than specified. The default gap extension penalty used have actually been 4.5 instead of 4
Consensus alignment generated by removing nucleotide positions for which the alignment differed when...
This patch fixes a bug introduced to stat_flow() in v0.12.0. See issue #64 for details
Recall from previous lecture we can find the alignment between two DNA sequences by either performin...
Version 2.1.11 fixes two bugs (issue #96) related to the SIMD implementation of alignment that might...
Fix rare bug with extremely short non-dereplicated sequences. Do not show alignment parameters for d...
Fix a bug with the fastidious option that caused it to ignore some connections between heavy and lig...
Rvision 0.6.2 New features New arcLength function. New Hu moment invariants function. New grabCut...
Fixes a minor bug where a C-OS bond length overrode a C-OH bond length, and a major bug introduced b...
Swarm testing is a novel and inexpensive way to improve the di-versity of test cases generated durin...
NEXUS alignment files for all taxa across UCE loci, having entries for taxa with missing data
Hot fix of bug involved with using `swarm_kwargs` in strip plots.iqplot: Bokeh plots with one quanti...
Fixes a bug in very small alignments loaded from FASTA files. The initial sequence was not counted i...
FIGURE S1. Example of a UCE alignment showing a short mismatch at one end. This portion of the align...
Major changes: Fix sigmas in 3D features so they are in voxel units and are adjusted based on the i...
What's new in v0.6.0 Graph Pearson or Spearman correlations between two samples in sliding windows....
Consensus alignment generated by removing nucleotide positions for which the alignment differed when...
This patch fixes a bug introduced to stat_flow() in v0.12.0. See issue #64 for details
Recall from previous lecture we can find the alignment between two DNA sequences by either performin...
Version 2.1.11 fixes two bugs (issue #96) related to the SIMD implementation of alignment that might...
Fix rare bug with extremely short non-dereplicated sequences. Do not show alignment parameters for d...
Fix a bug with the fastidious option that caused it to ignore some connections between heavy and lig...
Rvision 0.6.2 New features New arcLength function. New Hu moment invariants function. New grabCut...
Fixes a minor bug where a C-OS bond length overrode a C-OH bond length, and a major bug introduced b...
Swarm testing is a novel and inexpensive way to improve the di-versity of test cases generated durin...
NEXUS alignment files for all taxa across UCE loci, having entries for taxa with missing data
Hot fix of bug involved with using `swarm_kwargs` in strip plots.iqplot: Bokeh plots with one quanti...
Fixes a bug in very small alignments loaded from FASTA files. The initial sequence was not counted i...
FIGURE S1. Example of a UCE alignment showing a short mismatch at one end. This portion of the align...
Major changes: Fix sigmas in 3D features so they are in voxel units and are adjusted based on the i...
What's new in v0.6.0 Graph Pearson or Spearman correlations between two samples in sliding windows....
Consensus alignment generated by removing nucleotide positions for which the alignment differed when...
This patch fixes a bug introduced to stat_flow() in v0.12.0. See issue #64 for details
Recall from previous lecture we can find the alignment between two DNA sequences by either performin...
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