Moved documentation to separate mianalysis.github.io repository. This will automatically compile after each release using GitHub Actions. Modified usage of SubHyperStackMaker to account for different operation in latest version of ImageJ. Modified test images for 16 bit intensity inversion to match current ImageJ default behaviour
Updated access to scijava services. MIA class now has single ImageJService parameter ("ijService") ...
Added module for image registration based on object centroids (uses code from SIFT to align points) ...
Added ScaleStack module, which can apply 2D scaling to image stacks Improved file-list column handl...
Integrates the previously-separate sjcommon library into MIA and removes this as a dependency+ Minor...
Added file and folder paths as options for GlobalVariables Added "MIA_GetSliceAsROI" macro command -...
Changed namespace to io.github.mianalysis Standardised package names to be only lowercase Adds modul...
Changed Plugins menu name to "ModularImageAnalysis (MIA)" to make function more obvious Added list ...
Files for image analysis using MIA (Modular Image Analysis) plugin. Included are all MIA workflow f...
Added module to set spatial calibration of an image based on fixed values, GUI-selected values or ob...
Added ParameterGroup so Parameters can be added in sets (e.g. adding and removing filters). Added Ma...
Improve object tracking options for optimising linking based on absolute direction. Bugfixes for ima...
MIA is a software for deep learning based image analysis. It covers image labeling, neural network t...
Added temporal units as global variable for analysis (all loaded images are converted to these units...
Added image measurements as thresholding source for colocalisation modules Bugfix for FitGaussian2D ...
Added module for concave hull (2D) object detection Added module for object detection based on pixel...
Updated access to scijava services. MIA class now has single ImageJService parameter ("ijService") ...
Added module for image registration based on object centroids (uses code from SIFT to align points) ...
Added ScaleStack module, which can apply 2D scaling to image stacks Improved file-list column handl...
Integrates the previously-separate sjcommon library into MIA and removes this as a dependency+ Minor...
Added file and folder paths as options for GlobalVariables Added "MIA_GetSliceAsROI" macro command -...
Changed namespace to io.github.mianalysis Standardised package names to be only lowercase Adds modul...
Changed Plugins menu name to "ModularImageAnalysis (MIA)" to make function more obvious Added list ...
Files for image analysis using MIA (Modular Image Analysis) plugin. Included are all MIA workflow f...
Added module to set spatial calibration of an image based on fixed values, GUI-selected values or ob...
Added ParameterGroup so Parameters can be added in sets (e.g. adding and removing filters). Added Ma...
Improve object tracking options for optimising linking based on absolute direction. Bugfixes for ima...
MIA is a software for deep learning based image analysis. It covers image labeling, neural network t...
Added temporal units as global variable for analysis (all loaded images are converted to these units...
Added image measurements as thresholding source for colocalisation modules Bugfix for FitGaussian2D ...
Added module for concave hull (2D) object detection Added module for object detection based on pixel...
Updated access to scijava services. MIA class now has single ImageJService parameter ("ijService") ...
Added module for image registration based on object centroids (uses code from SIFT to align points) ...
Added ScaleStack module, which can apply 2D scaling to image stacks Improved file-list column handl...
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