Publication date
June 2016
DOIAbstract
What's new Wrappers for DNA aligners available: NUCMER, LAST Batch Ks calculations Misc bug fixes for ALLMAPS Calculate DUST and TRF bed Imputation, liftover and STR predictio
What's new Wrappers for DNA aligners available: NUCMER, LAST Batch Ks calculations Misc bug fixes for ALLMAPS Calculate DUST and TRF bed Imputation, liftover and STR predictio
Whole genome alignment .delta file from the nucmer tool of MUMmer. Only scaffolds larger than 1 Mb a...
3.18.6 (2022-11-15) Performance Improvements update to varlociraptor 5.3.3 (#178) (41fe68a
First release of the DCS prediction wrapper scripts for other chromosomes than mm10/chr1
What's new GRABSEEDS now imports Pillow Documentation for karyotype synteny plot Short tandem repea...
Upgrade to HIVdb 9.4 (#884) and fix alignment bugs (#887, #963, #899). See the milestone for a compl...
Added ability to cluster sequences based on nucleotide sequence rather than translations, useful if ...
Bug Fixes fix insufficient data leading to probabilities of 0 leading to nulls in alignment propert...
This update includes exclusively changes to the Nanopore reference alignment workflow. Some notable ...
New major release, adding the following features and fixing the following bugs: Added Multi-channel...
Aligned nucleotide sequences of the complete genome of JEV/Bo/Aichi/1/2010 and other JEV isolates (a...
Add softclip bias for detecting SNV or MNV artifacts induced by alignment issues (@johanneskoester)....
4.0.1 (2023-06-14) Bug Fixes update varlociraptor (#244) (361c9ee) Performance Improvements updat...
1.1.3 - Patch release - 2019-02-04 Multiple smaller bugfixes, cleaned up code basis #48 - Utilizes ...
3.19.3 (2023-01-15) Performance Improvements update to varlociraptor 5.6.1 (#189) (4c34c84
Bug Fixes zcsr_proj does not fail with unsorted indices (by Jake Lishman) Fixed Milstein's heterody...
Whole genome alignment .delta file from the nucmer tool of MUMmer. Only scaffolds larger than 1 Mb a...
3.18.6 (2022-11-15) Performance Improvements update to varlociraptor 5.3.3 (#178) (41fe68a
First release of the DCS prediction wrapper scripts for other chromosomes than mm10/chr1
What's new GRABSEEDS now imports Pillow Documentation for karyotype synteny plot Short tandem repea...
Upgrade to HIVdb 9.4 (#884) and fix alignment bugs (#887, #963, #899). See the milestone for a compl...
Added ability to cluster sequences based on nucleotide sequence rather than translations, useful if ...
Bug Fixes fix insufficient data leading to probabilities of 0 leading to nulls in alignment propert...
This update includes exclusively changes to the Nanopore reference alignment workflow. Some notable ...
New major release, adding the following features and fixing the following bugs: Added Multi-channel...
Aligned nucleotide sequences of the complete genome of JEV/Bo/Aichi/1/2010 and other JEV isolates (a...
Add softclip bias for detecting SNV or MNV artifacts induced by alignment issues (@johanneskoester)....
4.0.1 (2023-06-14) Bug Fixes update varlociraptor (#244) (361c9ee) Performance Improvements updat...
1.1.3 - Patch release - 2019-02-04 Multiple smaller bugfixes, cleaned up code basis #48 - Utilizes ...
3.19.3 (2023-01-15) Performance Improvements update to varlociraptor 5.6.1 (#189) (4c34c84
Bug Fixes zcsr_proj does not fail with unsorted indices (by Jake Lishman) Fixed Milstein's heterody...
Whole genome alignment .delta file from the nucmer tool of MUMmer. Only scaffolds larger than 1 Mb a...
3.18.6 (2022-11-15) Performance Improvements update to varlociraptor 5.3.3 (#178) (41fe68a
First release of the DCS prediction wrapper scripts for other chromosomes than mm10/chr1
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