Meiotic crossover detection from single-cell DNA sequencing of sperm cells and bulk DNA sequencing of BC1F1 pups

This repository contains: The preprocessing workflows (in Snakemake files) for analysing the single-cell DNA sequencing of sperm cells and bulk DNA sequencing from Fancm mice for crossover detection The HTML analysis reports The R scripts used for generating figures in the manuscriptRaw sequencing read data is available from ENA (European Nucleotide Archive) with accession number PRJEB5709