pypeit/PypeIt: Version 1.4.0

CHANGES Include a fix for when no edges are detected in EdgeTraceSet by adding the bound_detector parameter. Most instruments have a default of bound_detector = False meaning that the code will skip processing any detector where no slit edges are found. Some instuments set the default to be bound_detector = True because the slit edges always or often fall off the edge of the detector (i.e., the detector is fully illuminated). These instruments are currently mmt_mmirs, mmt_bluechannel, not_alfosc, and shane_kast; note that some gemini_gmos data in the DevSuite require bound_detector=True, as well. Improved wavelength template for DEIMOS gratings: 600ZD, 830G. Added new ArI, KrI, NeI, XeI arc lines. PypeIt can now compute arc line FWHM from the lines themselves. This is controlled by a new parset, fwhm_fromlines, which is set to False by default, except for DEIMOS. Added a development document about the DEIMOS wavelength calibration. Limit reduction to detectors 3 and 7 when DEIMOS LVM mask is used (other detectors are empty) Add wavelength RMS to SpecObj. This is an update of the datamodel to 1.3.3 Add Bok B&C spectrograph Add pypeit_obslog script that simple compiles and prints metadata from a set of fits files needed by pypeit to run. Change PypeItSetup.from_file_root to require the output path to write the vanilla pypeit file. If no path is provided, the object is instatiated without creating any output. Fixed bug in sensitivity function code adressing issue #747. Revamped sensitivity function completely to compute zeropoints and throughput. Enhanced sensfunc.py QA. Added MOSFIRE QL script. Added support for VLT/SINFONI K 25mas (0.8x0.8 arcsec FOV) platescale Updated docs for differencing imaging sky subtraction. Added "sky" frametype for difference imaging sky subtraction addressing issue # 1068 Improved and sped up sensitivity function telluric codes. Fixed bugs in ArchiveReid automatic wavelength identification. Removed numba dependency. Improved pypeit_view_fits script. Fixed ginga bugs in display.py and added automatic cuts to show_2dspec Added latin hypercube sampler to pypeit.utils which is required for differential evolution optimizations. Improved GMOS R400 wavelength solution Turned off GMOS-S binning restriction Add GTC OSIRIS spectrograph Updates for docs on adding new spectrographs. And a bok test Added a new pypeit_collate_1d tool to automatically group 1D Spectra from multiple files by group and coadd them. PypeIt will now add HISTORY keyword entries to FITS files. use_maskdesign is turned off for DEIMOS LVM masks a new parameter use_user_fwhm is added in ExtractionPar to allow the user to set their preferred fwhm Improved slittrace.assign_maskinfo PypeIt can now force extractions of DEIMOS non detected objects at the location expected from slitmask design. SpecObj and SlitTrace datamodel versions updated pypeit_show_2dspec shows traces of forced extraction and manual extraction with a different colors Updated docs about extraction and DEIMO