What's Changed FIX: Remove public_aws_ecr profile by @maxulysse in https://github.com/nf-core/sarek/pull/1118 FIX: Remove default null in schema by @maxulysse in https://github.com/nf-core/sarek/pull/1119 CHORES: Prepare 3.2.3 by @asp8200 in https://github.com/nf-core/sarek/pull/1128 Release candidate 3.2.3 by @asp8200 in https://github.com/nf-core/sarek/pull/1129 Full Changelog: https://github.com/nf-core/sarek/compare/3.2.2...3.2.
Added Added large scale 'stress-test' profile for AWS (using de Barros Damgaard et al. 2018's 137 a...
Porting to DSL2 Use CRAM files where possible Add new tools: DragMap, DeepVariant, Joint germline ca...
Add GATK Spark possibilities (#76) Add CNVkit (#153) Add MSIsensor (#163) Improve support for minima...
What's Changed CHORES: back to dev by @maxulysse in https://github.com/nf-core/sarek/pull/1073 f...
What's Changed FIX: Fix default memory issue with gatk4/createsequencedictionary by @maxulysse in h...
What's Changed Release 3.1.2 by @maxulysse in https://github.com/nf-core/sarek/pull/906 Full Ch...
What's Changed Syn up dev by @maxulysse in https://github.com/nf-core/sarek/pull/849 Remove "Non...
What's Changed Back to business on dev by @maxulysse in https://github.com/nf-core/sarek/pull/762...
What's Changed Important! Template update for nf-core/tools v2.8 by @nf-core-bot in https://github....
First release within nf-core Compliant within all nf-core requirements One script to rule them ...
What's Changed Fix MapReads caching bug by @BrunoGrandePhD in https://github.com/nf-core/sarek/pull...
What's Changed Fix Vep plugin usage by @BarryDigby in https://github.com/nf-core/sarek/pull/688 Fix...
Update GATK from 4.1.6.0 to 4.1.7.0 (#214) Fix channels collision between Freebayes and Mutect2 (#21...
What's Changed Fix usage of intervals in samtools/mpileup by @nickhsmith in https://github.com/nf-c...
Fix singularity.autoMounts issue (#48) Use correct tag for annotation containers (#49) Fix paths for...
Added Added large scale 'stress-test' profile for AWS (using de Barros Damgaard et al. 2018's 137 a...
Porting to DSL2 Use CRAM files where possible Add new tools: DragMap, DeepVariant, Joint germline ca...
Add GATK Spark possibilities (#76) Add CNVkit (#153) Add MSIsensor (#163) Improve support for minima...
What's Changed CHORES: back to dev by @maxulysse in https://github.com/nf-core/sarek/pull/1073 f...
What's Changed FIX: Fix default memory issue with gatk4/createsequencedictionary by @maxulysse in h...
What's Changed Release 3.1.2 by @maxulysse in https://github.com/nf-core/sarek/pull/906 Full Ch...
What's Changed Syn up dev by @maxulysse in https://github.com/nf-core/sarek/pull/849 Remove "Non...
What's Changed Back to business on dev by @maxulysse in https://github.com/nf-core/sarek/pull/762...
What's Changed Important! Template update for nf-core/tools v2.8 by @nf-core-bot in https://github....
First release within nf-core Compliant within all nf-core requirements One script to rule them ...
What's Changed Fix MapReads caching bug by @BrunoGrandePhD in https://github.com/nf-core/sarek/pull...
What's Changed Fix Vep plugin usage by @BarryDigby in https://github.com/nf-core/sarek/pull/688 Fix...
Update GATK from 4.1.6.0 to 4.1.7.0 (#214) Fix channels collision between Freebayes and Mutect2 (#21...
What's Changed Fix usage of intervals in samtools/mpileup by @nickhsmith in https://github.com/nf-c...
Fix singularity.autoMounts issue (#48) Use correct tag for annotation containers (#49) Fix paths for...
Added Added large scale 'stress-test' profile for AWS (using de Barros Damgaard et al. 2018's 137 a...
Porting to DSL2 Use CRAM files where possible Add new tools: DragMap, DeepVariant, Joint germline ca...
Add GATK Spark possibilities (#76) Add CNVkit (#153) Add MSIsensor (#163) Improve support for minima...