Fixes plot issues, metadata parsing issues (thanks @tkchafin !), refines methods for covariants and associated plotting in plot-covariants
This is a maintenance release that aims to keep up with plotlyjs 2.x incremental updates. The only m...
moves lineage metadata downloading to freyja update, defaults to cov-lineages lineage list (to handl...
This is a minor bug fix release including a number of crucial fixes for issues reported by our users...
Fixes to freyja covariants. beta addition of barcode_build function. Small bug fixes for freyja plot
Uses updates downloaded from repo by default (updated and recorded with github action). Adds weekly ...
Fix bug in plot_pairs which crashes in case of 1 parameter Fix bug in plot_marginals which outputs ...
Update barcodes Now pulls barcodes from GISAID tree by default Variants Added option to include a...
Adds lineage collapse functionality to account for sequencing coverage (using the --depthcutoff opti...
Plots v1.24.4 Diff since v1.24.3 Closed issues: rotate z axis label in surface plot (#606) Plotly l...
Updated plot_cpdb2 to make it more usable. What's Changed add correlationSpot function by @zktuong ...
Adds read analysis tools for mutation cluster detection and visualization, as well as mutation speci...
Fix #13 Thanks to @david1309 for pointing out the fix New argument labels for plot_confusion_matrix....
Bug fixes and new function, plot_cpdb4 What's Changed Update r.yml by @zktuong in https://github.co...
New Functionality added plot saving functionality for full, glass, and min views predict now uses b...
Plots displaying the performance of different mechanisms for modified Haslemere dataset.</p
This is a maintenance release that aims to keep up with plotlyjs 2.x incremental updates. The only m...
moves lineage metadata downloading to freyja update, defaults to cov-lineages lineage list (to handl...
This is a minor bug fix release including a number of crucial fixes for issues reported by our users...
Fixes to freyja covariants. beta addition of barcode_build function. Small bug fixes for freyja plot
Uses updates downloaded from repo by default (updated and recorded with github action). Adds weekly ...
Fix bug in plot_pairs which crashes in case of 1 parameter Fix bug in plot_marginals which outputs ...
Update barcodes Now pulls barcodes from GISAID tree by default Variants Added option to include a...
Adds lineage collapse functionality to account for sequencing coverage (using the --depthcutoff opti...
Plots v1.24.4 Diff since v1.24.3 Closed issues: rotate z axis label in surface plot (#606) Plotly l...
Updated plot_cpdb2 to make it more usable. What's Changed add correlationSpot function by @zktuong ...
Adds read analysis tools for mutation cluster detection and visualization, as well as mutation speci...
Fix #13 Thanks to @david1309 for pointing out the fix New argument labels for plot_confusion_matrix....
Bug fixes and new function, plot_cpdb4 What's Changed Update r.yml by @zktuong in https://github.co...
New Functionality added plot saving functionality for full, glass, and min views predict now uses b...
Plots displaying the performance of different mechanisms for modified Haslemere dataset.</p
This is a maintenance release that aims to keep up with plotlyjs 2.x incremental updates. The only m...
moves lineage metadata downloading to freyja update, defaults to cov-lineages lineage list (to handl...
This is a minor bug fix release including a number of crucial fixes for issues reported by our users...
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