Bugfixes with multi-segment genomes where the reference sequence names are not in alpha order. Improvements to lastal taxon filter default parameters based on optimization experiments with a broader range of diverse viruses
The use of next generation sequencing (NGS) to identify novel viral sequences from eukaryotic tissue...
Updates: make easy-deploy script more generic (less Broad specific) more documentation updates bug...
Next generation, high throughput sequencing has revolutionised the way in which we are able to view ...
Robust behavior in depletion, assembly and metagenomics for empty or almost-empty data sets. More in...
Tune nucmer parameters in scaffolding step to tolerate more diverse viruses (HIV, Influenza). Misc b...
An analysis package for viral sequence data. Includes read processing (human depletion, etc), de no...
Bug fixes, tested support for multi-segment genomes, and ability to download FASTAs, feature tables,...
The taxonomic classification of viral sequences is frequently used for the rapid identification of p...
Implementation of basic metagenomics tools: kraken and krona. Bug fix for silent tool failures intro...
<p>The contigs split by virus species defined through closest homolog and sorted by the descending t...
The genome sequence is the only characteristic readily obtainable for all known viruses, underlying ...
viruses) have profound consequences on viral evolution, including the formation of quasispe-cies. Th...
The variants of concern (VoCs) of SARS-CoV-2 have highlighted the need for a global molecular survei...
The genome sequence is the only characteristic readily obtainable for all known viruses, underlying ...
Microbiomes from every environment contain a myriad of uncultivated archaeal and bacterial viruses, ...
The use of next generation sequencing (NGS) to identify novel viral sequences from eukaryotic tissue...
Updates: make easy-deploy script more generic (less Broad specific) more documentation updates bug...
Next generation, high throughput sequencing has revolutionised the way in which we are able to view ...
Robust behavior in depletion, assembly and metagenomics for empty or almost-empty data sets. More in...
Tune nucmer parameters in scaffolding step to tolerate more diverse viruses (HIV, Influenza). Misc b...
An analysis package for viral sequence data. Includes read processing (human depletion, etc), de no...
Bug fixes, tested support for multi-segment genomes, and ability to download FASTAs, feature tables,...
The taxonomic classification of viral sequences is frequently used for the rapid identification of p...
Implementation of basic metagenomics tools: kraken and krona. Bug fix for silent tool failures intro...
<p>The contigs split by virus species defined through closest homolog and sorted by the descending t...
The genome sequence is the only characteristic readily obtainable for all known viruses, underlying ...
viruses) have profound consequences on viral evolution, including the formation of quasispe-cies. Th...
The variants of concern (VoCs) of SARS-CoV-2 have highlighted the need for a global molecular survei...
The genome sequence is the only characteristic readily obtainable for all known viruses, underlying ...
Microbiomes from every environment contain a myriad of uncultivated archaeal and bacterial viruses, ...
The use of next generation sequencing (NGS) to identify novel viral sequences from eukaryotic tissue...
Updates: make easy-deploy script more generic (less Broad specific) more documentation updates bug...
Next generation, high throughput sequencing has revolutionised the way in which we are able to view ...
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