Recca 0.1.39 (2023-01-24) Tests once again all passing on all test rigs of GitHub Actions. Tests had been failing due to new code that correctly detects unit errors (inhomogeneity) for some upstream swim calculations with services as the last stage in an ECC. Move tests associated with verify_cols_missing() from the Recca package to matsindf. Those tests didn't belong in Recca, because verify_cols_missing() is no longer in Recca. Eliminated data frame rows for a couple tests that were producing NA values due to unit inhomogeneity. Switched to simpler formulas derived by MKH for new_R_ps(). Eliminated tidyselect warnings. write_ecc_to_excel() now ensures that columns of U and rows of V are the same, even if it means adding zero columns ...
Bug fixes Factor columns can now have custom names rather than ENV, GEN, and REP only (#2). New fu...
v01-08 2019-02-07 Emilia Leogrande (PR#49) Clone checker: if equal length, keep the one with the b...
DeCiFer now outputs "NaN" for confidence intervals (CIs) for clusters to which no mutations were ass...
Recca 0.1.42 (2023-06-02) Fixed a bug where writing Matrix objects failed in write_ecc_to_excel(). ...
Recca 0.1.41 (2023-04-28) Responded to policy changes in matsindf::matsindf_apply() by setting defa...
Recca 0.1.43 (2023-08-18) Completed the aggregations vignette. New function pfu_aggregates() is a w...
matsindf 0.3.12 (2023-01-24) Fixed a differential error message challenge for tests. Move tests ass...
Recca 0.1.40 (2023-01-25) This version contains only fixes to the continuous integration build syst...
Recca 0.1.38 (2022-04-02) Removed unnecessary assertion that matsbyname is available in aggregation...
Recca 0.1.36 (2021-09-10) Get started file updated. Some matrices definitions (G, H, E) needed to b...
Recca 0.1.37 (2021-10-13) Added details to Recca vignette, including additional equations for embod...
Addition Added ability to retry/rerun crashed calculations (retry_calc: 1). For now only supported ...
Recca 0.1.35 (2021-08-20) R matrix formulation now adopted for input output calculations, for upstr...
Updates Bug Fixes Total Flux Function: Unnecessary lines in the mtu.calc_u_tot_flux() function whic...
Added Functions to concatenate input damages across batches. (PR #83, @davidrzhdu) New unit tests f...
Bug fixes Factor columns can now have custom names rather than ENV, GEN, and REP only (#2). New fu...
v01-08 2019-02-07 Emilia Leogrande (PR#49) Clone checker: if equal length, keep the one with the b...
DeCiFer now outputs "NaN" for confidence intervals (CIs) for clusters to which no mutations were ass...
Recca 0.1.42 (2023-06-02) Fixed a bug where writing Matrix objects failed in write_ecc_to_excel(). ...
Recca 0.1.41 (2023-04-28) Responded to policy changes in matsindf::matsindf_apply() by setting defa...
Recca 0.1.43 (2023-08-18) Completed the aggregations vignette. New function pfu_aggregates() is a w...
matsindf 0.3.12 (2023-01-24) Fixed a differential error message challenge for tests. Move tests ass...
Recca 0.1.40 (2023-01-25) This version contains only fixes to the continuous integration build syst...
Recca 0.1.38 (2022-04-02) Removed unnecessary assertion that matsbyname is available in aggregation...
Recca 0.1.36 (2021-09-10) Get started file updated. Some matrices definitions (G, H, E) needed to b...
Recca 0.1.37 (2021-10-13) Added details to Recca vignette, including additional equations for embod...
Addition Added ability to retry/rerun crashed calculations (retry_calc: 1). For now only supported ...
Recca 0.1.35 (2021-08-20) R matrix formulation now adopted for input output calculations, for upstr...
Updates Bug Fixes Total Flux Function: Unnecessary lines in the mtu.calc_u_tot_flux() function whic...
Added Functions to concatenate input damages across batches. (PR #83, @davidrzhdu) New unit tests f...
Bug fixes Factor columns can now have custom names rather than ENV, GEN, and REP only (#2). New fu...
v01-08 2019-02-07 Emilia Leogrande (PR#49) Clone checker: if equal length, keep the one with the b...
DeCiFer now outputs "NaN" for confidence intervals (CIs) for clusters to which no mutations were ass...