Fixing the wrong p-value computation in for chicViewpoint. New method is more accurate for floating points. Fixing a bug in chicViewpointBackgroundModel and chicQualityControl if an non-existing reference point was used. Improving all chic* modules with a capturing of errors in sub-processes. It is now guaranteed that the computation will terminate. Either successfull or by error. Add option 'truncateZero' to chicViewpointBackgroundModel: This removes all zero values for the distributions before fitting to fight over dispersion. Add option 'decimalPlaces' to chicViewpoint to adjust the decimal places in the output for all floating values. Helpful for really small p-values Add option 'truncateZeroPvalues' to chicSignificantInteractions to s...
The newest HiCExplorer release is the first release to support only Python 3, Python 2 support is di...
Bug fix: p-values are correctly added to the nested coefficients tibble. Adds tests of this table as...
This release fixes a severe bug overestimating the charge of ions when used with the boundElectrons ...
Bug fix labels chicPlotViewpoint concerning the MB value range Add option to chicViewpoint to pre-co...
This release fixes a bug in chicViewpoint that caused a crash if the data to be averaged is less tha...
Fixing many bugs: A bug in hicDetectLoops if a sub-matrix was very small A bug in hicPlotMatrix if t...
Release 3.4 of HiCExplorer comes with improvements in the documentation and smaller bug fixes: Fixi...
Adding the new captured Hi-C module. Viewpoint analysis based on a background model, significant int...
Bug fix release: enforcing version 15 of HiCMatrix. Version 14 had a bug concerning the application...
Fixing a bug in hicHyperoptDetectLoops concerning the validation of the loop locations Fixing a bug ...
The third bugfix release of version 2.1 corrects an error in hicPlotViewpoint. It adds a feature req...
Major update for hicDetectLoops: Results are now closer to HiCCUPS, it is faster and needs less memo...
fixes: ligation point computation in certain cases multi-chimeras were counted twice in many cases ...
Improving the documentation hicPlotMatrix: add three options: change font size, change rotation of X...
The 2.1 version of HiCExplorer comes with new features and bugfixes. Adding the new feature hicAggr...
The newest HiCExplorer release is the first release to support only Python 3, Python 2 support is di...
Bug fix: p-values are correctly added to the nested coefficients tibble. Adds tests of this table as...
This release fixes a severe bug overestimating the charge of ions when used with the boundElectrons ...
Bug fix labels chicPlotViewpoint concerning the MB value range Add option to chicViewpoint to pre-co...
This release fixes a bug in chicViewpoint that caused a crash if the data to be averaged is less tha...
Fixing many bugs: A bug in hicDetectLoops if a sub-matrix was very small A bug in hicPlotMatrix if t...
Release 3.4 of HiCExplorer comes with improvements in the documentation and smaller bug fixes: Fixi...
Adding the new captured Hi-C module. Viewpoint analysis based on a background model, significant int...
Bug fix release: enforcing version 15 of HiCMatrix. Version 14 had a bug concerning the application...
Fixing a bug in hicHyperoptDetectLoops concerning the validation of the loop locations Fixing a bug ...
The third bugfix release of version 2.1 corrects an error in hicPlotViewpoint. It adds a feature req...
Major update for hicDetectLoops: Results are now closer to HiCCUPS, it is faster and needs less memo...
fixes: ligation point computation in certain cases multi-chimeras were counted twice in many cases ...
Improving the documentation hicPlotMatrix: add three options: change font size, change rotation of X...
The 2.1 version of HiCExplorer comes with new features and bugfixes. Adding the new feature hicAggr...
The newest HiCExplorer release is the first release to support only Python 3, Python 2 support is di...
Bug fix: p-values are correctly added to the nested coefficients tibble. Adds tests of this table as...
This release fixes a severe bug overestimating the charge of ions when used with the boundElectrons ...