Relaxed the requirement on the number of unique values for QTs to 2 from 10 Fix bug in joint tests on burden masks which caused the software to crash Fix bug which occurred in ACATV when mask contained a single variant and its p-value was N
Bug fixes to address Firth convergence issues and with --catCovarList with --interactio
Bug Fix and Improvements Fixed bug in Qfit masking that would set curvature plan, profile, and twis...
Fixes a bug when validating a target-identical variant against a target sequence
New option --par-region to specify build to determine bounds for chrX PAR regions New option --force...
Fix inflation issue when testing main effect of SNP in GxE model (due to rare variants tested with r...
Switch to robust version of ACAT to handle very small p-values Bug fix for Step1 when sex chromosome...
Fixed a bug that caused genomic multi-variants to fail regex validation.If you use this software, pl...
Bug fix for SKAT/SKATO when testing on binary traits using Firth/SPA Switched name of NNLS joint tes...
Use ACAT to get SBAT p-value across POS/NEG models and use it in GENE_P Use pseudo-data representati...
Add new columns in sumstats file (N_CASES/N_CONTROLS) to output the number of cases/controls when us...
Improve efficiency of LOVO scheme for large sets to significantly reduce memory usage New option --l...
Relax tolerance parameter for null unpenalized logistic regression from 1e-8 to 1e-6 Bug fix for SKA...
HOTFIX This patch includes a number of minor bug fixes: Fixed the issue of weird ('*',) line labels...
What's Changed Bugfixes Fix bug in JAX cloning of RNG shared variables by @ricardoV94 in https://g...
fixed a bug related to wrong calculation of R2 in case of multiple response variables (PLS2) refacto...
Bug fixes to address Firth convergence issues and with --catCovarList with --interactio
Bug Fix and Improvements Fixed bug in Qfit masking that would set curvature plan, profile, and twis...
Fixes a bug when validating a target-identical variant against a target sequence
New option --par-region to specify build to determine bounds for chrX PAR regions New option --force...
Fix inflation issue when testing main effect of SNP in GxE model (due to rare variants tested with r...
Switch to robust version of ACAT to handle very small p-values Bug fix for Step1 when sex chromosome...
Fixed a bug that caused genomic multi-variants to fail regex validation.If you use this software, pl...
Bug fix for SKAT/SKATO when testing on binary traits using Firth/SPA Switched name of NNLS joint tes...
Use ACAT to get SBAT p-value across POS/NEG models and use it in GENE_P Use pseudo-data representati...
Add new columns in sumstats file (N_CASES/N_CONTROLS) to output the number of cases/controls when us...
Improve efficiency of LOVO scheme for large sets to significantly reduce memory usage New option --l...
Relax tolerance parameter for null unpenalized logistic regression from 1e-8 to 1e-6 Bug fix for SKA...
HOTFIX This patch includes a number of minor bug fixes: Fixed the issue of weird ('*',) line labels...
What's Changed Bugfixes Fix bug in JAX cloning of RNG shared variables by @ricardoV94 in https://g...
fixed a bug related to wrong calculation of R2 in case of multiple response variables (PLS2) refacto...
Bug fixes to address Firth convergence issues and with --catCovarList with --interactio
Bug Fix and Improvements Fixed bug in Qfit masking that would set curvature plan, profile, and twis...
Fixes a bug when validating a target-identical variant against a target sequence
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