This document describes the process used by subject matter experts (SMEs) for downloading HuBMAP image data, generating manual annotations of structures such as functional tissue units (FTUs), and uploading the annotations to a storage location. The audience for this SOP is the group of subject matter experts (SMEs) who are tasked with annotating FTUs in image data, typically a histologist recommended by the PI associated with the organ of interest. The current tool preferred for this process is QuPath
Artificial intelligence (AI) holds much promise for enabling highly desired imaging diagnostics impr...
This repository contains the data documented in the paper "Segmentation of human functional tissue u...
Optical imaging provides critical spatial data for the vast network of cell types and anatomical str...
This document describes the process used by subject matter experts (SMEs) for downloading HuBMAP ima...
This SOP describes the procedures for designing and creating 2D illustrations of functional tissue u...
This SOP describes the procedures for designing and creating 2D illustrations of functional tissue u...
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) Master tables aim to capture the nested ...
The rationale of this Standard Operating Procedure (SOP) is to serve as a practical guide for the HU...
The procedures outlined in this document describe how Anatomical Structures, Cell Types and Biomarke...
This document contains instructions for spatially registering human tissue to a 3D reference organ u...
This document contains instructions for spatially registering human tissue to a 3D reference organ u...
This SOP outlines procedures for capturing a specific extraction site once and then assigning this s...
A great deal of data in functional genomics studies needs to be annotated with low-resolution anatom...
Objective: Digital pathology is today a widely used technology, and the digitalization of microscopi...
Objective: Digital pathology is today a widely used technology, and the digitalization of microscopi...
Artificial intelligence (AI) holds much promise for enabling highly desired imaging diagnostics impr...
This repository contains the data documented in the paper "Segmentation of human functional tissue u...
Optical imaging provides critical spatial data for the vast network of cell types and anatomical str...
This document describes the process used by subject matter experts (SMEs) for downloading HuBMAP ima...
This SOP describes the procedures for designing and creating 2D illustrations of functional tissue u...
This SOP describes the procedures for designing and creating 2D illustrations of functional tissue u...
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) Master tables aim to capture the nested ...
The rationale of this Standard Operating Procedure (SOP) is to serve as a practical guide for the HU...
The procedures outlined in this document describe how Anatomical Structures, Cell Types and Biomarke...
This document contains instructions for spatially registering human tissue to a 3D reference organ u...
This document contains instructions for spatially registering human tissue to a 3D reference organ u...
This SOP outlines procedures for capturing a specific extraction site once and then assigning this s...
A great deal of data in functional genomics studies needs to be annotated with low-resolution anatom...
Objective: Digital pathology is today a widely used technology, and the digitalization of microscopi...
Objective: Digital pathology is today a widely used technology, and the digitalization of microscopi...
Artificial intelligence (AI) holds much promise for enabling highly desired imaging diagnostics impr...
This repository contains the data documented in the paper "Segmentation of human functional tissue u...
Optical imaging provides critical spatial data for the vast network of cell types and anatomical str...