Changes: Reimplement Hex in python to improve performance and robustness Fix several typos in the documentation Remove the undocumented field is_rna_available in the patient model Set more specific versions for some python dependencie
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descript...
Bugfixes: Library distributed version was not specified and it was causing some incompatibility wit...
Major Changes The annotation of neoantigen candidates from mouse are supported Uniprot instead of e...
Bugfixes set expression_mutated_transcript to use RNA VAF by default instead of DNA VAF. (Only vers...
This is a minor relase, covering the following points: update of README integration of HEX Kno...
Release equivalent to v0.3.0, this one should come out with a DOI for referencing this software
Bugfixes Fix the documentation. Now the documentation at readthedocs is up to date Fix crash in neo...
Major changes Added a model for epitopes Optionally, output a table with all annotated epitopes obt...
Bugfix on swapped tumor and normal BAMs in the nextflow workflow. The Python package version remains...
This is a minor release that fixes a bug introduced in v0.5.2. external annotation were not added in...
Changes Removes pickle-mixin from dependencies Upgrades pysam version to 0.19.1 Fix biopython versi...
This is a minor release 0.5.2 fix of the documenation estimate features such as pathogensimilarity,...
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descript...
Changes Add support for STAR for RNA-seq alignment Record software versions in the samples outpu
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descript...
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descript...
Bugfixes: Library distributed version was not specified and it was causing some incompatibility wit...
Major Changes The annotation of neoantigen candidates from mouse are supported Uniprot instead of e...
Bugfixes set expression_mutated_transcript to use RNA VAF by default instead of DNA VAF. (Only vers...
This is a minor relase, covering the following points: update of README integration of HEX Kno...
Release equivalent to v0.3.0, this one should come out with a DOI for referencing this software
Bugfixes Fix the documentation. Now the documentation at readthedocs is up to date Fix crash in neo...
Major changes Added a model for epitopes Optionally, output a table with all annotated epitopes obt...
Bugfix on swapped tumor and normal BAMs in the nextflow workflow. The Python package version remains...
This is a minor release that fixes a bug introduced in v0.5.2. external annotation were not added in...
Changes Removes pickle-mixin from dependencies Upgrades pysam version to 0.19.1 Fix biopython versi...
This is a minor release 0.5.2 fix of the documenation estimate features such as pathogensimilarity,...
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descript...
Changes Add support for STAR for RNA-seq alignment Record software versions in the samples outpu
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descript...
Annotation of mutated peptide sequences (mps) with published or novel potential neo-epitope descript...
Bugfixes: Library distributed version was not specified and it was causing some incompatibility wit...
Major Changes The annotation of neoantigen candidates from mouse are supported Uniprot instead of e...
DOI
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