RadioAstronomySoftwareGroup/pyuvdata: Version 2.2.9

This version adds many new features and improvements, the highlights are: New uvh5 version with support for multiple phase centers. Support for future array shapes in UVFlag. More comprehensive support for the SMA's MIR format. Reordering methods for UVCal. UVFITS parameters RDATE, UT1UTC and GSTIAO are now properly calculated. It also fixed a number of bugs including: A bug in UVData.__add__ with flexible spectral windows that contain overlapping frequencies. A bug in UVData.select when UVData._scan_number_array was set. A bug in UVBeam.select when selecting down to only auto polarization power beams. A bug in UVBeam.__add__ when adding cross pol power beams to auto pol power beams. Deprecations and dependency version changes: The "unphased" cat_type in phase_center_catalog is now called "unprojected". Dropped support for python 3.7 New minimum dependencies: astropy>= 5.0.4, numpy>=1.19, scipy>=1.3 New minimum optional dependencies: python-casacore>=3.3, pyyaml>=5.1, astropy-healpix>=0.6 Full changes detailed below and in our changelog: What's Changed fix mwa_corr_fits bscale handing by @PyxieLouStar in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1150 Fix CI errors from new pytest version by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1153 Update pre-commit config by @plaplant in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1154 fix test_mwa_corr_fits piping of keywords through read by @PyxieLouStar in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1156 Improve compress_by_redundancy docstring to explain flag handling by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1151 Update astropy requirement to 5.0.4 to fix IERS issue, drop python 3.7 support by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1164 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1165 Improve docs related to the basis vectors and components by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1161 Improving tolerance to flaky JPL-Horizons tests by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1166 Add methods to enable sorting along the various axes in UVCal by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1152 Cleanup read parameters and other minor cleanup by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1158 add mwax bandpass correction to mwa_corr_fits by @PyxieLouStar in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1167 Fix baseline number calculation and antenna number handling by @PyxieLouStar in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1148 Call methods to properly set up object in check by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1162 Make a github actions CI for the external tests by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1176 Streamlining the select method in UVData by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1171 Report the max imaginary part when complex autos are detected by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1168 Fixing add for flex-spw datasets by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1175 "Spoofless" writing of UVFITS files by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1177 Adding a warning to fix_phase by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1172 remove azure pipelines CI for external tests by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1179 Checking that UVBase attributes match their expected names by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1181 Update minimum version requirements, add minimum version CI by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1178 change setup-miniconda to use mamba instead by @mkolopanis in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1182 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1183 Pin version of setuptools_scm for installation and CI jobs by @plaplant in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1188 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1190 Unpin setuptools_scm by @plaplant in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1189 Improvements to MirParser class by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1125 Add Azure pipelines CI back by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1180 Enable normalizing cross-correlations by autos by @kartographer in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1191 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1196 Improve uvh5 storage of new phasing info by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1142 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1198 Add support for antenna numbers > 2047 by @PyxieLouStar in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1197 Add support for future array shapes in UVFlag by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1186 Prepare for new release (2.2.9) by @bhazelton in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1204 New Contributors @pre-commit-ci made their first contribution in https://github.com/RadioAstronomySoftwareGroup/pyuvdata/pull/1165 Full Changelog: https://github.com/RadioAstronomySoftwareGroup/pyuvdata/compare/v2.2.8...v2.2.