Publication date
December 2022
DOIAbstract
Bugfixes set expression_mutated_transcript to use RNA VAF by default instead of DNA VAF. (Only versions v1.0.0 & v1.0.1 used DNA VAF by default. Versions < v.1.0.0 use RNA VAF by default
Bugfixes set expression_mutated_transcript to use RNA VAF by default instead of DNA VAF. (Only versions v1.0.0 & v1.0.1 used DNA VAF by default. Versions < v.1.0.0 use RNA VAF by default
<p>The <i>yy11</i> allele, present as a background mutation in a <i>haf-6(ne335)</i> transgenic stoc...
The strong decoration of tRNAs with post-transcriptional modifications provides an unprecedented ada...
Changes Support for single sample through CLI parameters --input_name, --input_tumor_bam and --inpu...
Changes Add STAR for alignment of RNA-seq data Record software versions in the output Repositor...
Changes Removes pickle-mixin from dependencies Upgrades pysam version to 0.19.1 Fix biopython versi...
Neofox v0.5.0 release notes Major changes Update to NetMHCpan 4.1 Update to NetMHCIIpan 4.0 Int...
Background: By definition, effect of synonymous single-nucleotide variants (SNVs) on protein folding...
Balanced processing of HIV-1 RNA is critical to virus replication and is regulated by host factors. ...
This article is made available for unrestricted research re-use and secondary analysis in any form o...
(a) aa-tRNAs are synthesized by sampling from the amino acid pool and tRNA pool and require catalysi...
Non functional changes Migrate workflow to DSL 2 Make conda dependencies more granular Improve test
Transposable elements (TEs) comprise a substantial portion of many eukaryotic genomes and are typica...
Mistranslation is an error in protein synthesis whereby the amino acids specified by the genetic cod...
Genetic information is passed from DNA to RNA to protein through the processes of transcription and ...
International audienceTransfer RNAs (tRNAs) are essential components of the cellular protein synthes...
<p>The <i>yy11</i> allele, present as a background mutation in a <i>haf-6(ne335)</i> transgenic stoc...
The strong decoration of tRNAs with post-transcriptional modifications provides an unprecedented ada...
Changes Support for single sample through CLI parameters --input_name, --input_tumor_bam and --inpu...
Changes Add STAR for alignment of RNA-seq data Record software versions in the output Repositor...
Changes Removes pickle-mixin from dependencies Upgrades pysam version to 0.19.1 Fix biopython versi...
Neofox v0.5.0 release notes Major changes Update to NetMHCpan 4.1 Update to NetMHCIIpan 4.0 Int...
Background: By definition, effect of synonymous single-nucleotide variants (SNVs) on protein folding...
Balanced processing of HIV-1 RNA is critical to virus replication and is regulated by host factors. ...
This article is made available for unrestricted research re-use and secondary analysis in any form o...
(a) aa-tRNAs are synthesized by sampling from the amino acid pool and tRNA pool and require catalysi...
Non functional changes Migrate workflow to DSL 2 Make conda dependencies more granular Improve test
Transposable elements (TEs) comprise a substantial portion of many eukaryotic genomes and are typica...
Mistranslation is an error in protein synthesis whereby the amino acids specified by the genetic cod...
Genetic information is passed from DNA to RNA to protein through the processes of transcription and ...
International audienceTransfer RNAs (tRNAs) are essential components of the cellular protein synthes...
<p>The <i>yy11</i> allele, present as a background mutation in a <i>haf-6(ne335)</i> transgenic stoc...
The strong decoration of tRNAs with post-transcriptional modifications provides an unprecedented ada...
Changes Support for single sample through CLI parameters --input_name, --input_tumor_bam and --inpu...
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