gitter-lab/SINGE: Version 0.4.0

Changes in version 0.4.0 include: Support three modes of execution: MATLAB, compiled MATLAB executables with MATLAB runtime, or Docker The SINGE workflow has been split in GLG and Aggregate steps A wrapper script supports running the GLG and Aggregate steps individually or the entire workflow Increase robustness of hyperparameter parsing Add script to generate hyperparameter file Add usage guidelines Update Docker images are built on Travis CI Generalize Docker image to work outside the SINGE git repository Add default entrypoint to Docker image Test cases assert that the source code matches the compiled MATLAB executables All remaining instances of the old name SCINGE have been changed to SINGE Rename data1/tf.mat to data1/gene_list.mat and added data3 datase