This is a draft transcriptome assembly for Nippostrongylus brasiliensis (Nippo), generated by mapping cDNA reads from L3 larval stage Nippo to a genome assembly created from nanopore reads. More details about how this transcriptome was created can be found in the methods section of our paper: https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-017-0473-4#Par61 Three sequences from this transcriptome have been subselected, mapping to Fructose bisphosphatase, together with a nematode consensus sequence derived from the BUSCO nematode database. These sequences have been aligned and visualised in spiral form. Updates: 2021-Apr-01 - added original / unfiltered genome assembly and GFA graph [Nb_ONTCFED_65bpTrim_t1.contigs.fasta.gz...
Filarial nematode infections cause a substantial global disease burden. Genomic studies of filarial ...
The parasitic nematode, Brugia malayi, causes lymphatic filariasis in humans, which in severe cases ...
High-quality genomes obtained using long-read data allow not only for a better understanding of hete...
This is a draft transcriptome assembly for Nippostrongylus brasiliensis (Nippo), generated by mappin...
Background: Eukaryotic genome assembly remains a challenge in part due to the prevalence of complex ...
Potential orthologs of missing USCOs. a Venn diagram showing the overlap for USCOs flagged as missin...
Nippostrongylus brasiliensis, a nematode parasite of rodents, has a parasitic life cycle that is an ...
The nematode Panagrolaimus superbus can survive for extended peri- ods of time in a desiccated stat...
The distribution of the number of mapped reads for BUSCO sequences. The area in gray on the left-han...
Trichostrongylus colubriformis (Strongylida), a small intestinal nematode of small ruminants, is a m...
Background: Trichoplusia ni derived cell lines are commonly used to enable recombinant protein expre...
De novo transcriptome assembly was performed using Trinity (Haas et al. 2013) using RNA-Seq reads fr...
Efficient sequencing of animal and plant genomes by next-generation technology should allow many neg...
High throughput sequencing (HTS) provides new research opportunities for work on non-model organisms...
Assembly of mixed Biomphalaria glabrata embryonic transcriptome, from schistosome-free individuals. ...
Filarial nematode infections cause a substantial global disease burden. Genomic studies of filarial ...
The parasitic nematode, Brugia malayi, causes lymphatic filariasis in humans, which in severe cases ...
High-quality genomes obtained using long-read data allow not only for a better understanding of hete...
This is a draft transcriptome assembly for Nippostrongylus brasiliensis (Nippo), generated by mappin...
Background: Eukaryotic genome assembly remains a challenge in part due to the prevalence of complex ...
Potential orthologs of missing USCOs. a Venn diagram showing the overlap for USCOs flagged as missin...
Nippostrongylus brasiliensis, a nematode parasite of rodents, has a parasitic life cycle that is an ...
The nematode Panagrolaimus superbus can survive for extended peri- ods of time in a desiccated stat...
The distribution of the number of mapped reads for BUSCO sequences. The area in gray on the left-han...
Trichostrongylus colubriformis (Strongylida), a small intestinal nematode of small ruminants, is a m...
Background: Trichoplusia ni derived cell lines are commonly used to enable recombinant protein expre...
De novo transcriptome assembly was performed using Trinity (Haas et al. 2013) using RNA-Seq reads fr...
Efficient sequencing of animal and plant genomes by next-generation technology should allow many neg...
High throughput sequencing (HTS) provides new research opportunities for work on non-model organisms...
Assembly of mixed Biomphalaria glabrata embryonic transcriptome, from schistosome-free individuals. ...
Filarial nematode infections cause a substantial global disease burden. Genomic studies of filarial ...
The parasitic nematode, Brugia malayi, causes lymphatic filariasis in humans, which in severe cases ...
High-quality genomes obtained using long-read data allow not only for a better understanding of hete...