ICB-DCM/pyABC: pyABC 0.9.20
- Yannik Schälte
- drickert
- Emad Alamoudi
- neuralyzer
- Pat Laub
- Fabian Rost
Publication date
November 2019
DOIAbstract
Add high-level versions of the kde plotting routines (#204). Add unit tests for common epsilon schemes (#207)
Add high-level versions of the kde plotting routines (#204). Add unit tests for common epsilon schemes (#207)
Update to amici 0.11.19 for scaled residual support (#491) Add links for online execution of noteboo...
0.10.9 (2020-11-28) Add stopping criterion for total walltime (#370). 0.10.8 (2020-11-27) (forgott...
Some extensions of external simulators interface (#168). Add basic plots of summary statistics (#165...
Move to cffi>=1.13.1 after that bug was surprisingly quickly fixed (#195). Create sub-module for eps...
Remove bkcharts dependency (#328). Add optional progress bar to various samplers (#330). Refactor pa...
Fix dependency updates (rpy2, sklearn) and travis build. Add option to limit number of particles for...
Update CI test system: latest Ubuntu, python 3.8, simplify R build (#296). Add weights logging to ad...
Add optional check whether database is non-existent, to detect typos. Set lower bound in 1-dim KDEs ...
Update branch name master -> main in agreement with https://github.com/github/renaming (#406). Noteb...
Allow color customization for plot_credible_intervals plots (#414) pyABC logo to grey to fit with bo...
Check components for their adaptivity for correct application of look-ahead mode (#397)
Use latest pypi rpy2 version on travis and rtd since now the relevant issues were addressed there (e...
Implement color grouping by summary statistics and parameters in sankey plots (#536
Summary statistics: Allow transformed parameters as regression targets via ParTrafo (#478) Add Sank...
Implement Wasserstein and Sliced Wasserstein distances (#500) Add env variable to bound population s...
Update to amici 0.11.19 for scaled residual support (#491) Add links for online execution of noteboo...
0.10.9 (2020-11-28) Add stopping criterion for total walltime (#370). 0.10.8 (2020-11-27) (forgott...
Some extensions of external simulators interface (#168). Add basic plots of summary statistics (#165...
Move to cffi>=1.13.1 after that bug was surprisingly quickly fixed (#195). Create sub-module for eps...
Remove bkcharts dependency (#328). Add optional progress bar to various samplers (#330). Refactor pa...
Fix dependency updates (rpy2, sklearn) and travis build. Add option to limit number of particles for...
Update CI test system: latest Ubuntu, python 3.8, simplify R build (#296). Add weights logging to ad...
Add optional check whether database is non-existent, to detect typos. Set lower bound in 1-dim KDEs ...
Update branch name master -> main in agreement with https://github.com/github/renaming (#406). Noteb...
Allow color customization for plot_credible_intervals plots (#414) pyABC logo to grey to fit with bo...
Check components for their adaptivity for correct application of look-ahead mode (#397)
Use latest pypi rpy2 version on travis and rtd since now the relevant issues were addressed there (e...
Implement color grouping by summary statistics and parameters in sankey plots (#536
Summary statistics: Allow transformed parameters as regression targets via ParTrafo (#478) Add Sank...
Implement Wasserstein and Sliced Wasserstein distances (#500) Add env variable to bound population s...
Update to amici 0.11.19 for scaled residual support (#491) Add links for online execution of noteboo...
0.10.9 (2020-11-28) Add stopping criterion for total walltime (#370). 0.10.8 (2020-11-27) (forgott...
Some extensions of external simulators interface (#168). Add basic plots of summary statistics (#165...
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