This dataset contains the raw CyTOF images associated with the paper "An In-depth Map of the Melanoma Immune Microenvironment and Correlates of Immunotherapy Response by Imaging Mass Cytometry" (Moldoveanu et al. 2022). The MCD files output by CyTOF IMC were exported to one TIFF per channel per sample. This dataset contains one directory per sample (see Supplementary Table S1 for additional information). Each directory contains 46 TIFF images, which includes the 35 channels used in our study, 1 TIFF of the cell segmentation mask, and 10 TIFFs associated with background or unused channels
The following folders/files are part of this repository: Zip-Archive "MelanomaIMC-Zenodo": contai...
Immune modulation is considered a hallmark of cancer initiation and progression. The recent developm...
<p>Samples were stimulated with PMA-Ionomycin for 3 hours. Rows represent different maturational cel...
This dataset contains the raw IMC images (in the raw_tiff folder) and corresponding single cell mask...
- melanoma_IMC_data.zip The zip file contains the raw IMC images (in the raw_tiff folder) and corre...
Immunogenomics of colorectal cancer response to immune checkpoint blockade Imaging Mass Cytometry d...
Flow cytometry is a widely applied approach for exploratory immune profiling and biomarker discovery...
Flow cytometry is a widely applied approach for exploratory immune profiling and biomarker discovery...
All data supporting the publication: "Multiplexed imaging mass cytometry analysis characterizes the ...
This imaging mass cytometry (IMC) dataset serves as an example to demonstrate raw data processing an...
The following folders/files are part of this repository: Folder "rna": contains raw data from the...
The data comprise three types: Full stack tiff images that contain multiplexed imaging mass cytom...
A cohort of human breast tumor samples were annotated as having an "exhausted" or "non-exhausted" im...
Additional file 1: Figure S1. Immune cell expression heterogeneity and cell subsets distribution acr...
Datasets for Hartmann FJ et al. (2020) Single-cell metabolic profiling of human cytotoxic T cells. N...
The following folders/files are part of this repository: Zip-Archive "MelanomaIMC-Zenodo": contai...
Immune modulation is considered a hallmark of cancer initiation and progression. The recent developm...
<p>Samples were stimulated with PMA-Ionomycin for 3 hours. Rows represent different maturational cel...
This dataset contains the raw IMC images (in the raw_tiff folder) and corresponding single cell mask...
- melanoma_IMC_data.zip The zip file contains the raw IMC images (in the raw_tiff folder) and corre...
Immunogenomics of colorectal cancer response to immune checkpoint blockade Imaging Mass Cytometry d...
Flow cytometry is a widely applied approach for exploratory immune profiling and biomarker discovery...
Flow cytometry is a widely applied approach for exploratory immune profiling and biomarker discovery...
All data supporting the publication: "Multiplexed imaging mass cytometry analysis characterizes the ...
This imaging mass cytometry (IMC) dataset serves as an example to demonstrate raw data processing an...
The following folders/files are part of this repository: Folder "rna": contains raw data from the...
The data comprise three types: Full stack tiff images that contain multiplexed imaging mass cytom...
A cohort of human breast tumor samples were annotated as having an "exhausted" or "non-exhausted" im...
Additional file 1: Figure S1. Immune cell expression heterogeneity and cell subsets distribution acr...
Datasets for Hartmann FJ et al. (2020) Single-cell metabolic profiling of human cytotoxic T cells. N...
The following folders/files are part of this repository: Zip-Archive "MelanomaIMC-Zenodo": contai...
Immune modulation is considered a hallmark of cancer initiation and progression. The recent developm...
<p>Samples were stimulated with PMA-Ionomycin for 3 hours. Rows represent different maturational cel...