Publication date
May 2020
DOIAbstract
added taxonkit added entrez-direct added bit-update-ncbi-taxonomy script to update the database taxonkit uses adding bit-combine-bracken-and-add-lineage script fixed sys.exit() commands after help menu
added taxonkit added entrez-direct added bit-update-ncbi-taxonomy script to update the database taxonkit uses adding bit-combine-bracken-and-add-lineage script fixed sys.exit() commands after help menu
adding ambiguous character count and minimum contig length to bit-summarize-assembly added version i...
adding gtt-update-ncbi-taxonomy helper script to be able to easily keep the db up-to-date for use wi...
<p>added a quick assembly summary script, <code>bit-summarize-assembly</code></...
added taxonkit added entrez-direct added bit-update-ncbi-taxonomy script to update the database taxo...
added taxonkit added entrez-direct added bit-update-ncbi-taxonomy script to update the database taxo...
<p>updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports too</...
<p>updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports too</...
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
changing version access process, adding to each script caused problems i can't sort out at the momen...
<p>adding <code>bit-kraken2-to-taxon-summaries</code> and <code>bit-combine-...
improved bit-summarize-assembly, adding -v and --version flags to all python scripts (can still get ...
script to combine GO summarization files added more summary programs for covirt added (incorporating...
<ul> <li>updating <code>bit-summarize-assembly</code></li> </ul>
adding ambiguous character count and minimum contig length to bit-summarize-assembly added version i...
adding gtt-update-ncbi-taxonomy helper script to be able to easily keep the db up-to-date for use wi...
<p>added a quick assembly summary script, <code>bit-summarize-assembly</code></...
added taxonkit added entrez-direct added bit-update-ncbi-taxonomy script to update the database taxo...
added taxonkit added entrez-direct added bit-update-ncbi-taxonomy script to update the database taxo...
<p>updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports too</...
<p>updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports too</...
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
changing version access process, adding to each script caused problems i can't sort out at the momen...
<p>adding <code>bit-kraken2-to-taxon-summaries</code> and <code>bit-combine-...
improved bit-summarize-assembly, adding -v and --version flags to all python scripts (can still get ...
script to combine GO summarization files added more summary programs for covirt added (incorporating...
<ul> <li>updating <code>bit-summarize-assembly</code></li> </ul>
adding ambiguous character count and minimum contig length to bit-summarize-assembly added version i...
adding gtt-update-ncbi-taxonomy helper script to be able to easily keep the db up-to-date for use wi...
<p>added a quick assembly summary script, <code>bit-summarize-assembly</code></...
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