Fig. 3 in Alkaloid chemophenetics and transcriptomics of the Nicotiana genus

Fig. 3. PCC matrix between gene expressions mean RPKM values and mean alkaloid accumulation metabolite data. Genes are presented with their Gene ID and Identifiers (full description of genes with names in Fig. 1 & Table S2). Six gene-specific comparisons were performed to calculate Pearson correlation coefficient, as presented in the table: leaf nornicotine to nicotine content ratio vs. leaf gene expression; total nicotine content (leaf and root) vs. root gene expression; total anatabine content (leaf and root) vs. root gene expression; root anatabine to nicotine and nornicotine content ratio vs. root gene expression; total anabasine content (leaf and root) vs. root gene expression; total alkaloid content leaf to root ratio vs. root gene expression. PCC values range from −1 to 1, with red white conditioning in negative to positive correlation. PCC values in bold and marked with thick borders represent correlations of significant importance.Published as part of Kaminski, Kacper Piotr, Bovet, Lucien, Laparra, Helene, Lang, Gerhard, Palo, Damien De, Sierro, Nicolas, Goepfert, Simon & Ivanov, Nikolai V., 2020, Alkaloid chemophenetics and transcriptomics of the Nicotiana genus, pp. 1-11 in Phytochemistry (112424) 177 on page 8, DOI: 10.1016/j.phytochem.2020.112424, http://zenodo.org/record/829585