Python scripts for running Ca imaging pipeline on the miniscope data. The output are h5 files with the signal: fluorescence traces for the cells extracted from videos. Github: https://github.com/przemyslawj/caiman_script
CAIMAN (CAncer IMage ANalysis: http://www.caiman.org.uk) is an online algorithm repository that prov...
Advances in fluorescence microscopy enable monitoring larger brain areas in-vivo with finer time res...
Python scripts for processing of reactivity profiles for MS2 RNA which has undergone X-ray footprint...
CaFFlow is a Python framework designed for the acquisition and analysis of a variety of image/video ...
Advances in fluorescence microscopy enable monitoring larger brain areas in-vivo with finer time res...
This contains scripts and functions used in extracting stimulus responses from raw calcium imaging t...
Fluorescence calcium imaging using a range of microscopy approaches, such as two-photon excitation o...
optimap is an open-source Python toolbox for exploring, visualizing, and analyzing high-speed fluore...
htsimaging is a python package for the analysis of high-throughput single-cell imaging
This project is described in: A 6-nm ultra-photostable DNA FluoroCube for fluorescence imaging (2019...
Python application using PyQt and pyqtgraph for acquiring image sequences from Hamamatsu Orca Flash ...
PoMiDAQ is a recording software for UCLA Miniscopes for neuroscientific research. It provides an eas...
Single-molecule fluorescence microscopy studies of bacteria provide unique insights into the mechani...
Python scripts used in study to generate results and posterior predictive simulations. Information a...
Single-molecule fluorescence microscopy studies of bacteria provide unique insights into the mechani...
CAIMAN (CAncer IMage ANalysis: http://www.caiman.org.uk) is an online algorithm repository that prov...
Advances in fluorescence microscopy enable monitoring larger brain areas in-vivo with finer time res...
Python scripts for processing of reactivity profiles for MS2 RNA which has undergone X-ray footprint...
CaFFlow is a Python framework designed for the acquisition and analysis of a variety of image/video ...
Advances in fluorescence microscopy enable monitoring larger brain areas in-vivo with finer time res...
This contains scripts and functions used in extracting stimulus responses from raw calcium imaging t...
Fluorescence calcium imaging using a range of microscopy approaches, such as two-photon excitation o...
optimap is an open-source Python toolbox for exploring, visualizing, and analyzing high-speed fluore...
htsimaging is a python package for the analysis of high-throughput single-cell imaging
This project is described in: A 6-nm ultra-photostable DNA FluoroCube for fluorescence imaging (2019...
Python application using PyQt and pyqtgraph for acquiring image sequences from Hamamatsu Orca Flash ...
PoMiDAQ is a recording software for UCLA Miniscopes for neuroscientific research. It provides an eas...
Single-molecule fluorescence microscopy studies of bacteria provide unique insights into the mechani...
Python scripts used in study to generate results and posterior predictive simulations. Information a...
Single-molecule fluorescence microscopy studies of bacteria provide unique insights into the mechani...
CAIMAN (CAncer IMage ANalysis: http://www.caiman.org.uk) is an online algorithm repository that prov...
Advances in fluorescence microscopy enable monitoring larger brain areas in-vivo with finer time res...
Python scripts for processing of reactivity profiles for MS2 RNA which has undergone X-ray footprint...
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