What's Changed [MRG] split identifiers on whitespace, not just spaces. by @ctb in https://github.com/dib-lab/genome-grist/pull/150 [MRG] minor updates, incl. sourmash version updates. by @ctb in https://github.com/dib-lab/genome-grist/pull/160 [MRG] compress output signatures by @ctb in https://github.com/dib-lab/genome-grist/pull/158 [MRG] print out unknown config variables by @ctb in https://github.com/dib-lab/genome-grist/pull/161 [MRG] add a flag to prevent metagenome download from SRA by @ctb in https://github.com/dib-lab/genome-grist/pull/157 [MRG] add sourmash_database_threshold_bp to docs & config check by @ctb in https://github.com/dib-lab/genome-grist/pull/162 Full Changelog: https://github.com/dib-lab/genome-grist/compare/v0.8....
What's Changed Fix custom database for chemical identifiers by @JanLeppert in https://github.com/Ja...
Upgraded WDL to 1.0 Added metadata to WDL Removed hacky comments for Caper. meta for general metada...
Commits 52e11c0: improve tree label sizing (Richard Challis) 6f93f3c: split very large tree PNGs in...
What's Changed [MRG] update notebooks for long contig names; add normalized snp figure (fig 11) by ...
What's Changed [MRG] fix identifier munging for local databases by @ctb in https://github.com/dib-l...
Significant documentation updates as well as configuration file updates to support local databases. ...
What's Changed [MRG] add VCF-calculating code from #124 by @ctb in https://github.com/dib-lab/genom...
What's Changed [MRG] add code to support skipping genomes by ident by @ctb in https://github.com/di...
What's Changed [MRG] update sourmash and screed versions by @ctb in https://github.com/dib-lab/geno...
What's Changed [MRG] update ignore_ident code for later use too by @ctb in https://github.com/dib-l...
Upgrading to v0.9.0 There are several significant changes to output files from v0.8.4 that will affe...
What's Changed Rjchallis/issue86 by @rjchallis in https://github.com/genomehubs/genomehubs/pull/88 ...
What's Changed fix: move SOURCE_CLASS to cli (main branch) by @korikuzma in https://github.com/canc...
What's Changed GTDB-tk requires rule extract_gtdb to run first by @Waschina in https://github.com/m...
What's Changed Update README.md by @MMedzin in https://github.com/MMedzin/clustering-genomic-data/p...
What's Changed Fix custom database for chemical identifiers by @JanLeppert in https://github.com/Ja...
Upgraded WDL to 1.0 Added metadata to WDL Removed hacky comments for Caper. meta for general metada...
Commits 52e11c0: improve tree label sizing (Richard Challis) 6f93f3c: split very large tree PNGs in...
What's Changed [MRG] update notebooks for long contig names; add normalized snp figure (fig 11) by ...
What's Changed [MRG] fix identifier munging for local databases by @ctb in https://github.com/dib-l...
Significant documentation updates as well as configuration file updates to support local databases. ...
What's Changed [MRG] add VCF-calculating code from #124 by @ctb in https://github.com/dib-lab/genom...
What's Changed [MRG] add code to support skipping genomes by ident by @ctb in https://github.com/di...
What's Changed [MRG] update sourmash and screed versions by @ctb in https://github.com/dib-lab/geno...
What's Changed [MRG] update ignore_ident code for later use too by @ctb in https://github.com/dib-l...
Upgrading to v0.9.0 There are several significant changes to output files from v0.8.4 that will affe...
What's Changed Rjchallis/issue86 by @rjchallis in https://github.com/genomehubs/genomehubs/pull/88 ...
What's Changed fix: move SOURCE_CLASS to cli (main branch) by @korikuzma in https://github.com/canc...
What's Changed GTDB-tk requires rule extract_gtdb to run first by @Waschina in https://github.com/m...
What's Changed Update README.md by @MMedzin in https://github.com/MMedzin/clustering-genomic-data/p...
What's Changed Fix custom database for chemical identifiers by @JanLeppert in https://github.com/Ja...
Upgraded WDL to 1.0 Added metadata to WDL Removed hacky comments for Caper. meta for general metada...
Commits 52e11c0: improve tree label sizing (Richard Challis) 6f93f3c: split very large tree PNGs in...