Public release edition. Add a tutorial for reproducing the E. coli, E. faecalis, and S. aureus experiments from the mGEMS paper. Add the '--min-abundance' option for filtering the target bins by some minimum abundance threshold
<p>The main workflow of ASaiM, an open-source opinionated Galaxy-based framework for microbiota anal...
E. coli protocols is easy to use, provides results in 24 hours, and compares favorably with other me...
Enteric bacteriophages (somatic coliphages, F-specific coliphages or both together) are now recogniz...
This dataset contains the E. coli sequences (assembled with shovill v0.9.0), their sequence type 131...
This dataset contains the E. coli reference sequences for the strains that were used in the in vitro...
Genomic epidemiology is a tool for tracing transmission of pathogens based on whole-genome sequencin...
International audienceObjective: Bacterial contamination of drinking water is a public health concer...
It has been known that the tongue is like a rudder that can turn a big ship wherever. It is certainl...
Additional file 3: Figure S1. Growth of E. coli carrying different plasmids in minimal medium. A Com...
This dataset contains the long-read files that were used in hybrid assembly of the E. coli reference...
Male-specific or F+ coliphages are candidate microbial indicators of fecal contamination and enteric...
Additional file 2: Figure S1. Rarefaction curve for all sequenced samples. a Data derived from seque...
Measuring precise concentrations of proteins can provide insights into biological processes. Here we...
In this study we use a machine learning software (Ichnaea) to generate predictive models for water s...
""The rom of this study was the validation of the Micro Biological Survey (MBS) method for. microbio...
<p>The main workflow of ASaiM, an open-source opinionated Galaxy-based framework for microbiota anal...
E. coli protocols is easy to use, provides results in 24 hours, and compares favorably with other me...
Enteric bacteriophages (somatic coliphages, F-specific coliphages or both together) are now recogniz...
This dataset contains the E. coli sequences (assembled with shovill v0.9.0), their sequence type 131...
This dataset contains the E. coli reference sequences for the strains that were used in the in vitro...
Genomic epidemiology is a tool for tracing transmission of pathogens based on whole-genome sequencin...
International audienceObjective: Bacterial contamination of drinking water is a public health concer...
It has been known that the tongue is like a rudder that can turn a big ship wherever. It is certainl...
Additional file 3: Figure S1. Growth of E. coli carrying different plasmids in minimal medium. A Com...
This dataset contains the long-read files that were used in hybrid assembly of the E. coli reference...
Male-specific or F+ coliphages are candidate microbial indicators of fecal contamination and enteric...
Additional file 2: Figure S1. Rarefaction curve for all sequenced samples. a Data derived from seque...
Measuring precise concentrations of proteins can provide insights into biological processes. Here we...
In this study we use a machine learning software (Ichnaea) to generate predictive models for water s...
""The rom of this study was the validation of the Micro Biological Survey (MBS) method for. microbio...
<p>The main workflow of ASaiM, an open-source opinionated Galaxy-based framework for microbiota anal...
E. coli protocols is easy to use, provides results in 24 hours, and compares favorably with other me...
Enteric bacteriophages (somatic coliphages, F-specific coliphages or both together) are now recogniz...
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