With the new era of genomics, an increasing number of animal species are amenable to large-scale data generation. This had led to the emergence of new multi-species ontologies to annotate and organize these data. While anatomy and cell types are well covered by these efforts, information regarding development and life stages is also critical in the annotation of animal data. Its lack can hamper our ability to answer comparative biology questions and to interpret functional results. We present here a collection of development and life stage ontologies for 21 animal species, and their merge into a common multi-species ontology. This work has allowed the integration and comparison of transcriptomics data in 52 animal species. This is the pres...
Summary. The Common Anatomy Reference Ontology (CARO) is being developed to fa-cilitate interoperabi...
A full list of authors and affiliations appears at the end of the article. The transcriptome is the ...
The genome sequences of a large number of metazoan species are now known. As multiple closely relate...
With the new era of genomics, an increasing number of animal species are amenable to large-scale dat...
BACKGROUND: Elucidating disease and developmental dysfunction requires understanding variation in ph...
Extracting and formulating an animal trait ontology is the basis of building a trait database. The c...
Animals are grouped into ~35 'phyla' based upon the notion of distinct body plans. Morphological and...
Integration of information is quintessential to make use of the wealth of bioinformatics resources. ...
Special Issue: SIThe development and the use of ontologies contribute to a better organization and u...
Motivation: COMPARE is a multi-organism web-based resource system designed to easily retrieve, corre...
Phenotype ontologies are typically constructed to serve the needs of a particular community, such as...
The transcriptome is the readout of the genome. Identifying common features in it across distant spe...
Background: Comparative genomics studies are central in identifying the coding and non-coding elemen...
Animals are grouped into ~35 ‘phyla’ based upon the notion of distinct body plans. Morphological and...
Mouse anatomy ontologies provide standard nomenclature for describing normal and mutant mouse anatom...
Summary. The Common Anatomy Reference Ontology (CARO) is being developed to fa-cilitate interoperabi...
A full list of authors and affiliations appears at the end of the article. The transcriptome is the ...
The genome sequences of a large number of metazoan species are now known. As multiple closely relate...
With the new era of genomics, an increasing number of animal species are amenable to large-scale dat...
BACKGROUND: Elucidating disease and developmental dysfunction requires understanding variation in ph...
Extracting and formulating an animal trait ontology is the basis of building a trait database. The c...
Animals are grouped into ~35 'phyla' based upon the notion of distinct body plans. Morphological and...
Integration of information is quintessential to make use of the wealth of bioinformatics resources. ...
Special Issue: SIThe development and the use of ontologies contribute to a better organization and u...
Motivation: COMPARE is a multi-organism web-based resource system designed to easily retrieve, corre...
Phenotype ontologies are typically constructed to serve the needs of a particular community, such as...
The transcriptome is the readout of the genome. Identifying common features in it across distant spe...
Background: Comparative genomics studies are central in identifying the coding and non-coding elemen...
Animals are grouped into ~35 ‘phyla’ based upon the notion of distinct body plans. Morphological and...
Mouse anatomy ontologies provide standard nomenclature for describing normal and mutant mouse anatom...
Summary. The Common Anatomy Reference Ontology (CARO) is being developed to fa-cilitate interoperabi...
A full list of authors and affiliations appears at the end of the article. The transcriptome is the ...
The genome sequences of a large number of metazoan species are now known. As multiple closely relate...