Full summary statistics of mixQTL for GTEx v8 Pancreas

Qxpak: a versatile mixed model application for genetical genomics and QTL analyses

M. Pérez-enciso
I. Misztal

January 2004

Motivation: Current methodology and software for quantitat-ive trait loci (QTL) analyses do not use ...

Number of significant mQTL results in human pancreatic islets.

Anders H. Olsson (428022)
Petr Volkov (428018)
Karl Bacos (531659)
Tasnim Dayeh (428020)
Elin Hall (428021)
Emma A. Nilsson (655665)
Claes Ladenvall (135128)
Tina Rönn (253292)
Charlotte Ling (253302)

November 2014

Significance threshold <0.05 after correction for multiple testing.Correction value cis...

Number of significant mQTL results in human pancreatic islets when including imputed genotyped data.

Anders H. Olsson (428022)
Petr Volkov (428018)
Karl Bacos (531659)
Tasnim Dayeh (428020)
Elin Hall (428021)
Emma A. Nilsson (655665)
Claes Ladenvall (135128)
Tina Rönn (253292)
Charlotte Ling (253302)

November 2014

Significance threshold <0.05 after correction for multiple testing.Correction value cis...

Full summary statistics of mixQTL for GTEx v8 Stomach

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Testis

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Whole_Blood

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Prostate

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Brain_Cortex

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Artery_Tibial

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Cells_EBV-transformed_lymphocytes

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Extended data: Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx

Nicole R. Gay
Michael Gloudemans
Margaret L. Antonio
Brunilda Balliu
YoSon Park
Alicia R. Martin
Shaila Musharoff
Abhiram Rao
François Aguet
Alvaro Barbeira
Rodrigo Bonazzola
Farhad Hormozdiari
GTEx Consortium
Kristin G. Ardlie
Christopher D. Brown
Hae Kyung Im
Tuuli Lappalainen
Xiaoquan Wen
Stephen B. Montgomery

July 2020

eQTL summary statistics and GWAS colocalization posterior probabilities from eQTL calling in an admi...

sQTL catalog generated by sqtlseeker2-nf in the GTEx dataset

Garrido-Martín, Diego
Borsari, Beatrice
Calvo, Miquel
Reverter, Ferran
Guigó, Roderic

October 2020

sQTL catalog generated by sqtlseeker2-nf in the GTEx dataset, as described in the publication Identi...

Summary statistis for the InsPIRE consortium (pancreatic islets eQTLs)

Ana Viñuela
Arushi Varshney
Martijn van de Bunt
Rashmi Prasad
Olof Asplund
Amanda Bennett
Michael Boehnke
Andrew Brown
Michael Erdos
João Fadista
Ola Hansson
Gad Hatem
Cédric Howald
Apoorva K. Iyengar
Paul Johnson
Ulrika Krus
Patrick E. MacDonald
Anubha Mahajan
Jocelyn E. Manning Fox
Narisu Narisu
Vibe Nylander
Peter Orchard
NIkolaos I. Panousis
Anthony Payne
Michael Stitzel
Swarooparani Vadlamudi
Ryan Welch
Francis S. Collins
Karen Mohlke
Anna Gloyn
Laura J Scott
Emmanouil Dermitzakis
Leif Groop
Stephen Parker
Mark I McCarthy

September 2019

Summary statistics for the InsPIRE study: Influence of genetic variants on gene expression in human ...

mixQTL sample data

Liang, Yanyu
Barbeira, Alvaro Numa
Im, Hae Kyung

April 2020

# Introduction Sample data for mixQTL (https://github.com/liangyy/mixqtl). Data is derived from th...

Source code: Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx

Nicole R. Gay

July 2020

This version of the source code reflects analyses included in the peer-reviewed manuscript "Impact o...

Qxpak: a versatile mixed model application for genetical genomics and QTL analyses

M. Pérez-enciso
I. Misztal

January 2004

Motivation: Current methodology and software for quantitat-ive trait loci (QTL) analyses do not use ...

Number of significant mQTL results in human pancreatic islets.

Anders H. Olsson (428022)
Petr Volkov (428018)
Karl Bacos (531659)
Tasnim Dayeh (428020)
Elin Hall (428021)
Emma A. Nilsson (655665)
Claes Ladenvall (135128)
Tina Rönn (253292)
Charlotte Ling (253302)

November 2014

Significance threshold <0.05 after correction for multiple testing.Correction value cis...

Number of significant mQTL results in human pancreatic islets when including imputed genotyped data.

Anders H. Olsson (428022)
Petr Volkov (428018)
Karl Bacos (531659)
Tasnim Dayeh (428020)
Elin Hall (428021)
Emma A. Nilsson (655665)
Claes Ladenvall (135128)
Tina Rönn (253292)
Charlotte Ling (253302)

November 2014

Significance threshold <0.05 after correction for multiple testing.Correction value cis...

Full summary statistics of mixQTL for GTEx v8 Stomach

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Testis

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Whole_Blood

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Prostate

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Brain_Cortex

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Artery_Tibial

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Full summary statistics of mixQTL for GTEx v8 Cells_EBV-transformed_lymphocytes

Liang, Yanyu
François Aguet
Alvaro Barbeira
Kristin Ardlie
Hae Kyung Im

September 2020

The mixQTL method is described in paper doi.org/10.1101/2020.04.22.050666. Please cite the original ...

Extended data: Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx

Nicole R. Gay
Michael Gloudemans
Margaret L. Antonio
Brunilda Balliu
YoSon Park
Alicia R. Martin
Shaila Musharoff
Abhiram Rao
François Aguet
Alvaro Barbeira
Rodrigo Bonazzola
Farhad Hormozdiari
GTEx Consortium
Kristin G. Ardlie
Christopher D. Brown
Hae Kyung Im
Tuuli Lappalainen
Xiaoquan Wen
Stephen B. Montgomery

July 2020

eQTL summary statistics and GWAS colocalization posterior probabilities from eQTL calling in an admi...

sQTL catalog generated by sqtlseeker2-nf in the GTEx dataset

Garrido-Martín, Diego
Borsari, Beatrice
Calvo, Miquel
Reverter, Ferran
Guigó, Roderic

October 2020

sQTL catalog generated by sqtlseeker2-nf in the GTEx dataset, as described in the publication Identi...

Summary statistis for the InsPIRE consortium (pancreatic islets eQTLs)

Ana Viñuela
Arushi Varshney
Martijn van de Bunt
Rashmi Prasad
Olof Asplund
Amanda Bennett
Michael Boehnke
Andrew Brown
Michael Erdos
João Fadista
Ola Hansson
Gad Hatem
Cédric Howald
Apoorva K. Iyengar
Paul Johnson
Ulrika Krus
Patrick E. MacDonald
Anubha Mahajan
Jocelyn E. Manning Fox
Narisu Narisu
Vibe Nylander
Peter Orchard
NIkolaos I. Panousis
Anthony Payne
Michael Stitzel
Swarooparani Vadlamudi
Ryan Welch
Francis S. Collins
Karen Mohlke
Anna Gloyn
Laura J Scott
Emmanouil Dermitzakis
Leif Groop
Stephen Parker
Mark I McCarthy

September 2019

Summary statistics for the InsPIRE study: Influence of genetic variants on gene expression in human ...

mixQTL sample data

Liang, Yanyu
Barbeira, Alvaro Numa
Im, Hae Kyung

April 2020

# Introduction Sample data for mixQTL (https://github.com/liangyy/mixqtl). Data is derived from th...

Source code: Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx

Nicole R. Gay

July 2020

This version of the source code reflects analyses included in the peer-reviewed manuscript "Impact o...

Qxpak: a versatile mixed model application for genetical genomics and QTL analyses

M. Pérez-enciso
I. Misztal

January 2004

Motivation: Current methodology and software for quantitat-ive trait loci (QTL) analyses do not use ...

Number of significant mQTL results in human pancreatic islets.

Anders H. Olsson (428022)
Petr Volkov (428018)
Karl Bacos (531659)
Tasnim Dayeh (428020)
Elin Hall (428021)
Emma A. Nilsson (655665)
Claes Ladenvall (135128)
Tina Rönn (253292)
Charlotte Ling (253302)

November 2014

Significance threshold <0.05 after correction for multiple testing.Correction value cis...

Number of significant mQTL results in human pancreatic islets when including imputed genotyped data.

Anders H. Olsson (428022)
Petr Volkov (428018)
Karl Bacos (531659)
Tasnim Dayeh (428020)
Elin Hall (428021)
Emma A. Nilsson (655665)
Claes Ladenvall (135128)
Tina Rönn (253292)
Charlotte Ling (253302)

November 2014

Significance threshold <0.05 after correction for multiple testing.Correction value cis...

Full summary statistics of mixQTL for GTEx v8 Pancreas

Abstract

Extracted data

Full summary statistics of mixQTL for GTEx v8 Pancreas

Abstract

Extracted data

Related items

Related items