HullUni-bioinformatics/Harper_et_al_2020_mustelid_diet_metabarcoding: GitHub repository deposited with Harper et al. (2020) on mustelid diet metabarcoding

HullUni-bioinformatics/Harper_et_al_2018_mammal_eDNA_metabarcoding: GitHub repository deposited with Chapter 6 of PhD Thesis for Lynsey Rebecca Harper at the University of Hull

lrharper1

November 2018

Data repository accompanying Chapter 6 of 'Rapid biodiversity monitoring of freshwater ponds using e...

Raw data (fastq), abundance tables and scripts from the study "Unravelling the dietary diversity of neotropical top predators using scat DNA metabarcoding: a case study on the elusive Giant Otter"

Erwan Quéméré
Marie Aucourd
Valérie Troispoux
Sébastien Brosse
Jérôme Murienne
Raphaël Covain
Pierre-Yves Le Bail
Jean Olivier
Niklas Tysklind
Maxime Galan

March 2021

This repository contains the raw data (R1 and R2 fastq files), abundance/final prey occurence tables...

Evaluating metabarcoding to analyse diet composition of species foraging in anthropogenic landscapes using Ion Torrent and Illumina sequencing

Forin-Wiart, Marie-Amélie
Poulle, Marie-Lazarine
Piry, Sylvain
Cosson, Jean-François
Larose, Claire
Galan, Maxime

January 2018

International audienceDNA metabarcoding of faecal samples is being successfully used to study the fo...

HullUni-bioinformatics/Harper_et_al_2020_mustelid_diet_metabarcoding: GitHub repository deposited with Harper et al. (2020) on mustelid diet metabarcoding

lrharper1

November 2020

Data repository accompanying the paper 'Using DNA metabarcoding to investigate diet and niche partit...

Using DNA metabarcoding to investigate diet and niche partitioning in the native European otter (Lutra lutra) and invasive American mink (Neovison vison)

Harper, Lynsey R.
Watson, Hayley V.
Donnelly, Robert
Hampshire, Richard
Sayer, Carl D.
Breithaupt, Thomas
Hänfling, Bernd

November 2020

In the UK, the native European otter (Lutra lutra) and invasive American mink (Neovison vison) have ...

HullUni-bioinformatics/Harper_et_al_2018_mammal_eDNA_metabarcoding: GitHub repository deposited with Harper et al. (2019) on mammal eDNA metabarcoding

lrharper1

February 2019

Data repository accompanying the paper 'Environmental DNA (eDNA) metabarcoding of pond water as a to...

Metabarcoding to decipher the fish diet of Eurasian otters and seals

Boyi, Joy Ometere
Hesse, Eileen
Rohner, Simon
Säurich, Josefin
Siebert, Ursula
Gilles, Anita
Lehnert, Kristina

July 2022

Long-lived top predators shape biodiversity structure in their ecosystems and predator-prey interact...

Unraveling the dietary diversity of Neotropical top predators using scat DNA metabarcoding: A case study on the elusive Giant Otter

Quéméré, Erwan
Aucourd, Marie
Troispoux, Valérie
Brosse, Sébastien
Murienne, Jérôme
Covain, Raphaël
Le Bail, Pierre-Yves
Olivier, Jean
Tysklind, Niklas
Galan, Maxime

January 2021

International audienceLarge carnivores play a pivotal regulating role in maintaining healthy and bal...

DNA metabarcoding-based diet survey for the Eurasian otter (Lutra lutra): Development of a Eurasian otter-specific blocking oligonucleotide for 12S rRNA gene sequencing for vertebrates.

Priyanka Kumari
Ke Dong
Kyung Yeon Eo
Woo-Shin Lee
Junpei Kimura
Naomichi Yamamoto

January 2019

The Eurasian otter (Lutra lutra) is an endangered species for which diet analyses are needed as part...

HullUni-bioinformatics/Harper_et_al_2018: GitHub repository deposited with Harper et al. (2018) on hypothesis testing using eDNA metabarcoding

lrharper1

July 2018

Data repository accompanying the paper 'Ground-truthing environmental DNA (eDNA) metabarcoding for e...

HullUni-bioinformatics/Harper_et_al_2018: GitHub repository deposited with Harper et al. (2018) in Ecology and Evolution.

lrharper1

March 2018

Data repository accompanying the paper 'Needle in a haystack? A comparison of eDNA metabarcoding and...

Comparison Of Four Carnivore Metabarcoding Library-Build Protocols

Pang, Kunjie

January 2021

DNA metabarcoding is a relatively new molecular tool for dietary analysis of wildlife populations fo...

Data from: DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

De Barba, Marta
Miquel, Christian
Boyer, Frederic
Mercier, Céline
Rioux, Delphine
Coissac, Eric
Taberlet, Pierre

Ecological understanding of the role of consumer-resource interactions in natural food webs is limit...

HullUni-bioinformatics/Harper_et_al_2018_mammal_eDNA_metabarcoding: GitHub repository deposited with Chapter 6 of PhD Thesis for Lynsey Rebecca Harper at the University of Hull

lrharper1

November 2018

Data repository accompanying Chapter 6 of 'Rapid biodiversity monitoring of freshwater ponds using e...

Raw data (fastq), abundance tables and scripts from the study "Unravelling the dietary diversity of neotropical top predators using scat DNA metabarcoding: a case study on the elusive Giant Otter"

Erwan Quéméré
Marie Aucourd
Valérie Troispoux
Sébastien Brosse
Jérôme Murienne
Raphaël Covain
Pierre-Yves Le Bail
Jean Olivier
Niklas Tysklind
Maxime Galan

March 2021

This repository contains the raw data (R1 and R2 fastq files), abundance/final prey occurence tables...

Evaluating metabarcoding to analyse diet composition of species foraging in anthropogenic landscapes using Ion Torrent and Illumina sequencing

Forin-Wiart, Marie-Amélie
Poulle, Marie-Lazarine
Piry, Sylvain
Cosson, Jean-François
Larose, Claire
Galan, Maxime

January 2018

International audienceDNA metabarcoding of faecal samples is being successfully used to study the fo...

HullUni-bioinformatics/Harper_et_al_2020_mustelid_diet_metabarcoding: GitHub repository deposited with Harper et al. (2020) on mustelid diet metabarcoding

lrharper1

November 2020

Data repository accompanying the paper 'Using DNA metabarcoding to investigate diet and niche partit...

Using DNA metabarcoding to investigate diet and niche partitioning in the native European otter (Lutra lutra) and invasive American mink (Neovison vison)

Harper, Lynsey R.
Watson, Hayley V.
Donnelly, Robert
Hampshire, Richard
Sayer, Carl D.
Breithaupt, Thomas
Hänfling, Bernd

November 2020

In the UK, the native European otter (Lutra lutra) and invasive American mink (Neovison vison) have ...

HullUni-bioinformatics/Harper_et_al_2018_mammal_eDNA_metabarcoding: GitHub repository deposited with Harper et al. (2019) on mammal eDNA metabarcoding

lrharper1

February 2019

Data repository accompanying the paper 'Environmental DNA (eDNA) metabarcoding of pond water as a to...

Metabarcoding to decipher the fish diet of Eurasian otters and seals

Boyi, Joy Ometere
Hesse, Eileen
Rohner, Simon
Säurich, Josefin
Siebert, Ursula
Gilles, Anita
Lehnert, Kristina

July 2022

Long-lived top predators shape biodiversity structure in their ecosystems and predator-prey interact...

Unraveling the dietary diversity of Neotropical top predators using scat DNA metabarcoding: A case study on the elusive Giant Otter

Quéméré, Erwan
Aucourd, Marie
Troispoux, Valérie
Brosse, Sébastien
Murienne, Jérôme
Covain, Raphaël
Le Bail, Pierre-Yves
Olivier, Jean
Tysklind, Niklas
Galan, Maxime

January 2021

International audienceLarge carnivores play a pivotal regulating role in maintaining healthy and bal...

DNA metabarcoding-based diet survey for the Eurasian otter (Lutra lutra): Development of a Eurasian otter-specific blocking oligonucleotide for 12S rRNA gene sequencing for vertebrates.

Priyanka Kumari
Ke Dong
Kyung Yeon Eo
Woo-Shin Lee
Junpei Kimura
Naomichi Yamamoto

January 2019

The Eurasian otter (Lutra lutra) is an endangered species for which diet analyses are needed as part...

HullUni-bioinformatics/Harper_et_al_2018: GitHub repository deposited with Harper et al. (2018) on hypothesis testing using eDNA metabarcoding

lrharper1

July 2018

Data repository accompanying the paper 'Ground-truthing environmental DNA (eDNA) metabarcoding for e...

HullUni-bioinformatics/Harper_et_al_2018: GitHub repository deposited with Harper et al. (2018) in Ecology and Evolution.

lrharper1

March 2018

Data repository accompanying the paper 'Needle in a haystack? A comparison of eDNA metabarcoding and...

Comparison Of Four Carnivore Metabarcoding Library-Build Protocols

Pang, Kunjie

January 2021

DNA metabarcoding is a relatively new molecular tool for dietary analysis of wildlife populations fo...

Data from: DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

De Barba, Marta
Miquel, Christian
Boyer, Frederic
Mercier, Céline
Rioux, Delphine
Coissac, Eric
Taberlet, Pierre

Ecological understanding of the role of consumer-resource interactions in natural food webs is limit...

HullUni-bioinformatics/Harper_et_al_2018_mammal_eDNA_metabarcoding: GitHub repository deposited with Chapter 6 of PhD Thesis for Lynsey Rebecca Harper at the University of Hull

lrharper1

November 2018

Data repository accompanying Chapter 6 of 'Rapid biodiversity monitoring of freshwater ponds using e...

Raw data (fastq), abundance tables and scripts from the study "Unravelling the dietary diversity of neotropical top predators using scat DNA metabarcoding: a case study on the elusive Giant Otter"

Erwan Quéméré
Marie Aucourd
Valérie Troispoux
Sébastien Brosse
Jérôme Murienne
Raphaël Covain
Pierre-Yves Le Bail
Jean Olivier
Niklas Tysklind
Maxime Galan

March 2021

This repository contains the raw data (R1 and R2 fastq files), abundance/final prey occurence tables...

Evaluating metabarcoding to analyse diet composition of species foraging in anthropogenic landscapes using Ion Torrent and Illumina sequencing

Forin-Wiart, Marie-Amélie
Poulle, Marie-Lazarine
Piry, Sylvain
Cosson, Jean-François
Larose, Claire
Galan, Maxime

January 2018

International audienceDNA metabarcoding of faecal samples is being successfully used to study the fo...

HullUni-bioinformatics/Harper_et_al_2020_mustelid_diet_metabarcoding: GitHub repository deposited with Harper et al. (2020) on mustelid diet metabarcoding

Abstract

Extracted data

HullUni-bioinformatics/Harper_et_al_2020_mustelid_diet_metabarcoding: GitHub repository deposited with Harper et al. (2020) on mustelid diet metabarcoding

Abstract

Extracted data

Related items

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