Publication date
September 2017
DOIAbstract
This version adds an O locus database, along with the necessary logic to correctly call O1 vs O2
This version adds an O locus database, along with the necessary logic to correctly call O1 vs O2
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v1.0.3...v1.0.
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v2.0.0...v2.1.
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v1.0.1...v1.0.
Same as previous version (v2.0.1) plus a bug fix: the special logic file for the A. baumannii K locu...
Changes in this version: The O3l and O3s loci had their names changed to O3/O3a and O3b, respective...
Updates / improvements in this version: Updated A. baumannii K locus database plus special logic fo...
Full Changelog: https://github.com/katholt/Kaptive/compare/v2.0.3...v2.0.4 Unicode errors in A. baum...
Added databases for Acinetobacter baumannii K and OC loci. Updated READme description of databases
Updates to improve the logic for choosing the best match locus when there is a blastn coverage tie t...
Addition of a novel K locus reference sequence (KL166) to the Klebsiella K locus primary reference d...
Addition of a novel K locus reference sequences (KL167-KL170) to the Klebsiella K locus primary refe...
Update to Klebsiella K locus primary reference database: Fixed annotation error for KL53: wcaJ --> w...
This release fixes the version mismatch between the release and running kaptive.py --version, but is...
This dataset uses the CK OO metrics. More information at http://openscience.us/repo/defect/ck/kalku...
Kaptive reports information about surface polysaccharide loci for Klebsiella pneumoniae species comp...
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v1.0.3...v1.0.
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v2.0.0...v2.1.
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v1.0.1...v1.0.
Same as previous version (v2.0.1) plus a bug fix: the special logic file for the A. baumannii K locu...
Changes in this version: The O3l and O3s loci had their names changed to O3/O3a and O3b, respective...
Updates / improvements in this version: Updated A. baumannii K locus database plus special logic fo...
Full Changelog: https://github.com/katholt/Kaptive/compare/v2.0.3...v2.0.4 Unicode errors in A. baum...
Added databases for Acinetobacter baumannii K and OC loci. Updated READme description of databases
Updates to improve the logic for choosing the best match locus when there is a blastn coverage tie t...
Addition of a novel K locus reference sequence (KL166) to the Klebsiella K locus primary reference d...
Addition of a novel K locus reference sequences (KL167-KL170) to the Klebsiella K locus primary refe...
Update to Klebsiella K locus primary reference database: Fixed annotation error for KL53: wcaJ --> w...
This release fixes the version mismatch between the release and running kaptive.py --version, but is...
This dataset uses the CK OO metrics. More information at http://openscience.us/repo/defect/ck/kalku...
Kaptive reports information about surface polysaccharide loci for Klebsiella pneumoniae species comp...
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v1.0.3...v1.0.
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v2.0.0...v2.1.
Full Changelog: https://github.com/ocbe-uio/contingencytables/compare/v1.0.1...v1.0.
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