Supplementary material 2 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling. ZooKeys 697: 87-131. https://doi.org/10.3897/zookeys.697.15124

Data from: "White-tailed deer (Odocoileus virginianus) transcriptome assembly and SNP discovery" in Genomic Resources Notes accepted 1 June 2013-31 July 2013

Malenfant, Rene
Davis, Corey
Moore, Stephen
Coltman, David

September 2013

White-tailed deer (Odocoileus virginianus) are among the most abundant and widespread large mammals ...

Technical Limitations Associated With Molecular Barcoding of Arthropod Bloodmeals Taken From North American Deer Species

Borland, Erin M.
Hartman, Daniel A.
Hopken, Matthew W.
Piaggio, Antoinette J.
Kading, Rebekah C.

January 2020

Accurate species-level identification of the source of arthropod bloodmeals is important for deciphe...

Supplementary material 3 from: Cifuentes-Rincón A, Morales-Donoso JA, Sandoval EDP, Tomazella IM, Mantellatto AMB, de Thoisy B, Duarte JMB (2020) Designation of a neotype for Mazama americana (Artiodactyla, Cervidae) reveals a cryptic new complex of brocket deer species. ZooKeys 958: 143-164. https://doi.org/10.3897/zookeys.958.50300

Cifuentes-Rincón, Analorena
Morales-Donoso, Jorge Alfonso
Sandoval, Eluzai Dinai Pinto
Tomazella, Iara Maluf
Mantellatto, Aline Meira Bonfim
de Thoisy, Benoit
Duarte, José Maurício Barbanti

August 2020

Table S3. Cranial measurements of M. americana neotype represented in millimeter

Supplementary material 1 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling. ZooKeys 697: 87-131. https://doi.org/10.3897/zookeys.697.15124

Gutiérrez, Eliécer E.
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T.R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

March 2022

Gazetteer : Authors: Eliécer E. Gutiérrez, Kristofer M. Helgen, Molly M. McDonough, Franziska Bauer,...

Figure 1b from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling. ZooKeys 697: 87-131. https://doi.org/10.3897/zookeys.697.15124

Gutiérrez, Eliécer E.
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T.R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

September 2017

Figure 1b - Phylogenetic tree of cytochrome-b sequences of Odocoileini (continuation). ...

Development of a Novel Mule Deer Genomic Assembly and Species-Diagnostic SNP Panel for Assessing Introgression in Mule Deer, White-Tailed Deer, and Their Interspecific Hybrids

Ty Russell
Catherine Cullingham
Arun Kommadath
Paul Stothard
Allen Herbst
David Coltman

March 2019

Mule deer (Odocoileus hemionus) are endemic to a wide variety of habitats in western North America, ...

Figure 2 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling. ZooKeys 697: 87-131. https://doi.org/10.3897/zookeys.697.15124

Gutiérrez, Eliécer E.
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T.R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

September 2017

Figure 2 - Overall morphological appearance of "M." pandora (panels A–C) and that of th...

Data from: A genotyping-in-thousands by sequencing panel to inform invasive deer management using non-invasive fecal and hair samples

Burgess, Brock
Irvine, Robyn
Russello, Michael

May 2022

Studies in ecology, evolution, and conservation often rely on non-invasive samples, making it challe...

Species identification of human and deer from mixed biological material

Tobe, Shanan
Linacre, Adrian

July 2007

The alleged illegal killing of mammals is a cause for forensic investigation. Species identification...

A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling

Peña, Gutiérrez
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T. R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

January 2017

The taxonomy of American deer has been established almost entirely on the basis of morphological dat...

Additional file 1 of Population genomics reveals moderate genetic differentiation between populations of endangered Forest Musk Deer located in Shaanxi and Sichuan

Gang Liu (13845838)
Bao-Feng Zhang (13845841)
Jiang Chang (13845844)
Xiao-Long Hu (13845847)
Chao Li (145513)
Tin-Tao Xu (13845850)
Shu-Qiang Liu (13845853)
De-Fu Hu (13845856)

September 2022

Additional file 1: Table S1. The sample information of 15 Forest Musk Deer individuals and the BioPr...

Data from: Browsed twig environmental DNA: diagnostic PCR to identify ungulate species

Nichols, Ruth V.
Königsson, Helena
Danell, Kjell
Spong, Göran

June 2012

Ungulate browsing can have a strong effect on ecological processes by affecting plant community stru...

Improving the genome assembly and annotation of the white-tailed deer (Odocoileus virginianus borealis)

London, Evan W.

September 2023

Widely distributed in North America, the white-tailed deer (Odocoileus virginianus) has recreational...

Data from: Candidate adaptive genes associated with lineage divergence: identifying SNPs via next-generation targeted resequencing in mule deer (Odocoileus hemionus)

Powell, John H.
Amish, Stephen J.
Haynes, Gwilym D.
Luikart, Gordon
Latch, Emily K.

July 2016

Mule deer (Odocoileus hemionus) are an excellent nonmodel species for empirically testing hypotheses...

Supplementary material 3 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

This spreadsheet contains the original identifications of specimens shipped to Trevor Goward for ide...

Data from: "White-tailed deer (Odocoileus virginianus) transcriptome assembly and SNP discovery" in Genomic Resources Notes accepted 1 June 2013-31 July 2013

Malenfant, Rene
Davis, Corey
Moore, Stephen
Coltman, David

September 2013

White-tailed deer (Odocoileus virginianus) are among the most abundant and widespread large mammals ...

Technical Limitations Associated With Molecular Barcoding of Arthropod Bloodmeals Taken From North American Deer Species

Borland, Erin M.
Hartman, Daniel A.
Hopken, Matthew W.
Piaggio, Antoinette J.
Kading, Rebekah C.

January 2020

Accurate species-level identification of the source of arthropod bloodmeals is important for deciphe...

Supplementary material 3 from: Cifuentes-Rincón A, Morales-Donoso JA, Sandoval EDP, Tomazella IM, Mantellatto AMB, de Thoisy B, Duarte JMB (2020) Designation of a neotype for Mazama americana (Artiodactyla, Cervidae) reveals a cryptic new complex of brocket deer species. ZooKeys 958: 143-164. https://doi.org/10.3897/zookeys.958.50300

Cifuentes-Rincón, Analorena
Morales-Donoso, Jorge Alfonso
Sandoval, Eluzai Dinai Pinto
Tomazella, Iara Maluf
Mantellatto, Aline Meira Bonfim
de Thoisy, Benoit
Duarte, José Maurício Barbanti

August 2020

Table S3. Cranial measurements of M. americana neotype represented in millimeter

Supplementary material 1 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling. ZooKeys 697: 87-131. https://doi.org/10.3897/zookeys.697.15124

Gutiérrez, Eliécer E.
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T.R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

March 2022

Gazetteer : Authors: Eliécer E. Gutiérrez, Kristofer M. Helgen, Molly M. McDonough, Franziska Bauer,...

Figure 1b from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling. ZooKeys 697: 87-131. https://doi.org/10.3897/zookeys.697.15124

Gutiérrez, Eliécer E.
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T.R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

September 2017

Figure 1b - Phylogenetic tree of cytochrome-b sequences of Odocoileini (continuation). ...

Development of a Novel Mule Deer Genomic Assembly and Species-Diagnostic SNP Panel for Assessing Introgression in Mule Deer, White-Tailed Deer, and Their Interspecific Hybrids

Ty Russell
Catherine Cullingham
Arun Kommadath
Paul Stothard
Allen Herbst
David Coltman

March 2019

Mule deer (Odocoileus hemionus) are endemic to a wide variety of habitats in western North America, ...

Figure 2 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling. ZooKeys 697: 87-131. https://doi.org/10.3897/zookeys.697.15124

Gutiérrez, Eliécer E.
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T.R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

September 2017

Figure 2 - Overall morphological appearance of "M." pandora (panels A–C) and that of th...

Data from: A genotyping-in-thousands by sequencing panel to inform invasive deer management using non-invasive fecal and hair samples

Burgess, Brock
Irvine, Robyn
Russello, Michael

May 2022

Studies in ecology, evolution, and conservation often rely on non-invasive samples, making it challe...

Species identification of human and deer from mixed biological material

Tobe, Shanan
Linacre, Adrian

July 2007

The alleged illegal killing of mammals is a cause for forensic investigation. Species identification...

A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling

Peña, Gutiérrez
Helgen, Kristofer M.
McDonough, Molly M.
Bauer, Franziska
Hawkins, Melissa T. R.
Escobedo-Morales, Luis A.
Patterson, Bruce D.
Maldonado, Jesus E.

January 2017

The taxonomy of American deer has been established almost entirely on the basis of morphological dat...

Additional file 1 of Population genomics reveals moderate genetic differentiation between populations of endangered Forest Musk Deer located in Shaanxi and Sichuan

Gang Liu (13845838)
Bao-Feng Zhang (13845841)
Jiang Chang (13845844)
Xiao-Long Hu (13845847)
Chao Li (145513)
Tin-Tao Xu (13845850)
Shu-Qiang Liu (13845853)
De-Fu Hu (13845856)

September 2022

Additional file 1: Table S1. The sample information of 15 Forest Musk Deer individuals and the BioPr...

Data from: Browsed twig environmental DNA: diagnostic PCR to identify ungulate species

Nichols, Ruth V.
Königsson, Helena
Danell, Kjell
Spong, Göran

June 2012

Ungulate browsing can have a strong effect on ecological processes by affecting plant community stru...

Improving the genome assembly and annotation of the white-tailed deer (Odocoileus virginianus borealis)

London, Evan W.

September 2023

Widely distributed in North America, the white-tailed deer (Odocoileus virginianus) has recreational...

Data from: Candidate adaptive genes associated with lineage divergence: identifying SNPs via next-generation targeted resequencing in mule deer (Odocoileus hemionus)

Powell, John H.
Amish, Stephen J.
Haynes, Gwilym D.
Luikart, Gordon
Latch, Emily K.

July 2016

Mule deer (Odocoileus hemionus) are an excellent nonmodel species for empirically testing hypotheses...

Supplementary material 3 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

This spreadsheet contains the original identifications of specimens shipped to Trevor Goward for ide...

Data from: "White-tailed deer (Odocoileus virginianus) transcriptome assembly and SNP discovery" in Genomic Resources Notes accepted 1 June 2013-31 July 2013

Malenfant, Rene
Davis, Corey
Moore, Stephen
Coltman, David

September 2013

White-tailed deer (Odocoileus virginianus) are among the most abundant and widespread large mammals ...

Technical Limitations Associated With Molecular Barcoding of Arthropod Bloodmeals Taken From North American Deer Species

Borland, Erin M.
Hartman, Daniel A.
Hopken, Matthew W.
Piaggio, Antoinette J.
Kading, Rebekah C.

January 2020

Accurate species-level identification of the source of arthropod bloodmeals is important for deciphe...

Supplementary material 3 from: Cifuentes-Rincón A, Morales-Donoso JA, Sandoval EDP, Tomazella IM, Mantellatto AMB, de Thoisy B, Duarte JMB (2020) Designation of a neotype for Mazama americana (Artiodactyla, Cervidae) reveals a cryptic new complex of brocket deer species. ZooKeys 958: 143-164. https://doi.org/10.3897/zookeys.958.50300

Cifuentes-Rincón, Analorena
Morales-Donoso, Jorge Alfonso
Sandoval, Eluzai Dinai Pinto
Tomazella, Iara Maluf
Mantellatto, Aline Meira Bonfim
de Thoisy, Benoit
Duarte, José Maurício Barbanti

August 2020

Table S3. Cranial measurements of M. americana neotype represented in millimeter

Abstract

Extracted data

Abstract

Extracted data

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