Sequencing projects, like the Aqua Genome project, generate vast amounts of data which is processed through dif- ferent work ows composed of several steps linked together. Currently, such workflows are often run manually on large servers. With the increasing amount of raw data that approach is no longer feasible. The successful imple- mentation of the project's goals requires 2-3 orders of magnitude scaling of computing, while achieving high reli- ability on and supporting ease-of-use of super computing resources at the same time. We describe two example use cases, the implementation challenges and constraints, the actual application enabling and report our ndings
Presentation at CyberColombia\u27s Third HPC Summer School: Bio and Data Science Part 1 describes...
Computers today become more powerful through increased numbers of processors rather than clock speed...
Computational biologists answer biological and biomedical questions by using computation in support ...
International audienceAbstract High-performance computing (HPC) systems have become indispensable fo...
The last decade has witnessed an explosion in the amount of available biological sequence data, due ...
Next Generation Sequencing has brought genomic analysis within the range of a great number of labor...
A revolution in personalized genomics will occur when scientists can sequence genomes of millions of...
Systems biology is based on computational modelling and simulation of large networks of interacting ...
This presentation took place during a session at the eResearch Australasia 2021 Conference 11-15 Oct...
According to Wikipedia [1], big data refers to a collec-tion of data sets so large and complex that ...
Genomic data analysis in evolutionary biology is becoming so computationally intensive that analysis...
The pace of extraordinary advances in molecular biology has accelerated in the past decade due in la...
This record includes training materials associated with the Australian BioCommons webinar ‘Pro tips ...
The post-genomic era is characterized by large amount of data available from sequencing projects. Th...
Ever since high-throughput DNA sequencing became economically feasible, the amount of biological dat...
Presentation at CyberColombia\u27s Third HPC Summer School: Bio and Data Science Part 1 describes...
Computers today become more powerful through increased numbers of processors rather than clock speed...
Computational biologists answer biological and biomedical questions by using computation in support ...
International audienceAbstract High-performance computing (HPC) systems have become indispensable fo...
The last decade has witnessed an explosion in the amount of available biological sequence data, due ...
Next Generation Sequencing has brought genomic analysis within the range of a great number of labor...
A revolution in personalized genomics will occur when scientists can sequence genomes of millions of...
Systems biology is based on computational modelling and simulation of large networks of interacting ...
This presentation took place during a session at the eResearch Australasia 2021 Conference 11-15 Oct...
According to Wikipedia [1], big data refers to a collec-tion of data sets so large and complex that ...
Genomic data analysis in evolutionary biology is becoming so computationally intensive that analysis...
The pace of extraordinary advances in molecular biology has accelerated in the past decade due in la...
This record includes training materials associated with the Australian BioCommons webinar ‘Pro tips ...
The post-genomic era is characterized by large amount of data available from sequencing projects. Th...
Ever since high-throughput DNA sequencing became economically feasible, the amount of biological dat...
Presentation at CyberColombia\u27s Third HPC Summer School: Bio and Data Science Part 1 describes...
Computers today become more powerful through increased numbers of processors rather than clock speed...
Computational biologists answer biological and biomedical questions by using computation in support ...