This upload contains the supplemental data to the manuscript titled, "Deep in the Bowel: Highly Interpretable Neural Encoder-Decoder Predicts Gut Metabolites from Gut Microbiome". It contains the transformed data used to train the model (*-grouped-clr.csv), the latent feature space (latent_z.txt), and the differential abundance results (*DA*.csv)
The human microbiome, comprising trillions of microorganisms, plays a pivotal role in modulating hos...
Data sets for analysis and visualization pipelines for screening the capacity of common gut bacteria...
Predicting the metabolic behavior of the human gut microbiota in different contexts is one of the mo...
Microbiomes are complex ecological systems that play crucial roles in understanding natural phenomen...
The human microbiota exhibit a highly dynamic composition over the course of life and changes in the...
The pattern of metabolites produced by the gut microbiome comprises a phenotype indicative of the me...
Despite the gut's longitudinal specialization for digestion and microbiome organization, most st...
Despite the gut’s longitudinal specialization for digestion and microbiome organization, most studie...
Integrating multiomics datasets is critical for microbiome research; however, inferring interactions...
Datasets accompanying Gut microbial genes are associated with neurocognition and brain development i...
Microbiome data are becoming increasingly available in large health cohorts, yet metabolomics data a...
Over the years, research studies have shown there is a key connection between the microbial communit...
Aims: To study the microbiome-gut-brain axis we aimed to identify profiles of fecal microbiota and m...
NGS Data Accompanying "Deep Learning Enables Design of Multifunctional Synthetic Human Gut Microbiom...
Abstract Background Microbiome-metabolome studies of the human gut have been gaining popularity in r...
The human microbiome, comprising trillions of microorganisms, plays a pivotal role in modulating hos...
Data sets for analysis and visualization pipelines for screening the capacity of common gut bacteria...
Predicting the metabolic behavior of the human gut microbiota in different contexts is one of the mo...
Microbiomes are complex ecological systems that play crucial roles in understanding natural phenomen...
The human microbiota exhibit a highly dynamic composition over the course of life and changes in the...
The pattern of metabolites produced by the gut microbiome comprises a phenotype indicative of the me...
Despite the gut's longitudinal specialization for digestion and microbiome organization, most st...
Despite the gut’s longitudinal specialization for digestion and microbiome organization, most studie...
Integrating multiomics datasets is critical for microbiome research; however, inferring interactions...
Datasets accompanying Gut microbial genes are associated with neurocognition and brain development i...
Microbiome data are becoming increasingly available in large health cohorts, yet metabolomics data a...
Over the years, research studies have shown there is a key connection between the microbial communit...
Aims: To study the microbiome-gut-brain axis we aimed to identify profiles of fecal microbiota and m...
NGS Data Accompanying "Deep Learning Enables Design of Multifunctional Synthetic Human Gut Microbiom...
Abstract Background Microbiome-metabolome studies of the human gut have been gaining popularity in r...
The human microbiome, comprising trillions of microorganisms, plays a pivotal role in modulating hos...
Data sets for analysis and visualization pipelines for screening the capacity of common gut bacteria...
Predicting the metabolic behavior of the human gut microbiota in different contexts is one of the mo...