Analysis of metabolite levels that correlate with protein structural changes across 8 metabolic conditions in E. coli, associated to the manuscript by Cappelletti et al., currently under consideration. Results are expressed as data from a given metabolic condition relative to growth in glucose. Plot title: Protein name_Peptide sequence, Metabolite X-axis: Log2 FC [LiP peptide (condition/glucose)] Y-axis: Log2 FC [Metabolite concentration (condition/glucose)] The following files contain the statistical parameters of the analysis (p and q-values and R-square values) for all the uploaded plots: - Statistics_p_and_q_values.txt - Statistics_R2.txtFDP = FBP (fructose-1,6-bisphosphate
Figure S2. Proteomic pipeline, sample-to-sample comparison, and insights from the in vitro PC proteo...
<p>High magnitude correlation coefficients in bold. r = correlation coefficient, p = significance le...
Clostridioides difficile (formerly Clostridium difficile) is a Gram-positive, anaerobe, spore-formin...
Analysis of metabolic fluxes that correlate with protein structural changes across 8 metabolic condi...
Metabolite, global peptide, phosphopeptide, global proteome, phosphoproteome, and phosphosite quanti...
Supplementary analyzed data from Manuscript: TITLE: A map of protein-metabolite interactions reveal...
Background: Recent development of novel technologies paved the way for quantitative proteomics. One ...
Supplementary analyzed data from Manuscript: TITLE: Maturation kinetics of a multiprotein complex r...
Figure S1. Analysis of murine fecal metaproteome data in the study of Tanca et al. using MetaPro-IQ ...
Figure S1. Scatterplots of the UPS1 dataset showing the position of the true positives and the true ...
Additional file 2. SWATH proteomics data. Contains a) PeakView output: raw data for ion, peptide and...
The files contain proteomics output datasets associated with the manuscript entitled: "Two inde...
We describe a novel LCMS approach to relative quantitation and simultaneous identification of protei...
The folder 'Mannitol' contains data from the two mixtures (M1, M2) in the mannitol background. The f...
<p>(a) Precursor mass error against relative number of peptide identifications for dataset I against...
Figure S2. Proteomic pipeline, sample-to-sample comparison, and insights from the in vitro PC proteo...
<p>High magnitude correlation coefficients in bold. r = correlation coefficient, p = significance le...
Clostridioides difficile (formerly Clostridium difficile) is a Gram-positive, anaerobe, spore-formin...
Analysis of metabolic fluxes that correlate with protein structural changes across 8 metabolic condi...
Metabolite, global peptide, phosphopeptide, global proteome, phosphoproteome, and phosphosite quanti...
Supplementary analyzed data from Manuscript: TITLE: A map of protein-metabolite interactions reveal...
Background: Recent development of novel technologies paved the way for quantitative proteomics. One ...
Supplementary analyzed data from Manuscript: TITLE: Maturation kinetics of a multiprotein complex r...
Figure S1. Analysis of murine fecal metaproteome data in the study of Tanca et al. using MetaPro-IQ ...
Figure S1. Scatterplots of the UPS1 dataset showing the position of the true positives and the true ...
Additional file 2. SWATH proteomics data. Contains a) PeakView output: raw data for ion, peptide and...
The files contain proteomics output datasets associated with the manuscript entitled: "Two inde...
We describe a novel LCMS approach to relative quantitation and simultaneous identification of protei...
The folder 'Mannitol' contains data from the two mixtures (M1, M2) in the mannitol background. The f...
<p>(a) Precursor mass error against relative number of peptide identifications for dataset I against...
Figure S2. Proteomic pipeline, sample-to-sample comparison, and insights from the in vitro PC proteo...
<p>High magnitude correlation coefficients in bold. r = correlation coefficient, p = significance le...
Clostridioides difficile (formerly Clostridium difficile) is a Gram-positive, anaerobe, spore-formin...