CVUA-RRW/FooDMe: foodme v1.5.0

1.5.0 This update is not backwards compatible. A configuration file update is nescessary. New features Benchmark module is live with possibility to compare results to an expected sample composition. The benchmark module will output the comparison results and several useful metrics in an HTML report. It can be used directly for validation or parameter space exploration. Non backward compatible changes Added the benchmarking module which can be called with snakemake benchmark Added required parameters in the config file The python wrapper is now deprecated. See the documentation on how to use configuration files. Dependencies Added a dependency to Scikit-learn Updated R packages dependency in the rmarkdown environment Documentation Added documentation for the benchmark modul