Publication date
July 2023
DOIAbstract
version-1.7 2023-07-12 - fix merge (issue#73) we remove the samtools dependency and build bam unsing bgzip compatible with samtools. Options are the same. - add hash table collision detection (issue#74
version-1.7 2023-07-12 - fix merge (issue#73) we remove the samtools dependency and build bam unsing bgzip compatible with samtools. Options are the same. - add hash table collision detection (issue#74
BioAlignments v2.3.0 Diff since v2.2.0 Closed issues: Outdated documentation for SAM/BAM in BioAlig...
Adds support for new UK Biobank field 20283 "Resolved plate swaps" and fixes other minor bugs (see N...
What's Changed Enforce using CURIEs for all relationships by @cthoyt in https://github.com/biopragm...
Lot of things in this release. See the documentation especially for htslib support (tested with htsl...
version-1.9 2023-07-20 - fix a problem during parsing (issue #81) - fix a memory leak (issue #82) - ...
version 1.8 07/13/2023 Fix a memory leak in bitonic (issue #77) Merge the unmapped reads, now we h...
version-1.1 2020-06-09 - release the memory bounds when sorting with power of 2 MPI jobs - fix unbal...
version-1.5.1 2021-02-27 - fix some memory leaks - fix trouble when compressing very small buffer - ...
Tool to interconvert between various bioinformatics formats that BioPython support
Tool to interconvert between various bioinformatics formats that BioPython support
Minor release version-1.0.2 BUG FIXES Fix bug when no NBR fragments are found NEW FEATURES add d...
Commits bee68fa: fix setting zSclae from md (Richard Challis) 2c9c7fb: catch bioproject accession i...
Functions for comparing and merging sets of multiple bins are now available. New example data inclu...
Commits 6de5b56: Bump version: 0.5.63 → 0.5.64-dev (GitHub Action) 005a836: Add CURIE parse benchma...
Workaround fix for sam files with no reads causing failure in bamsort. This is likely only to occur...
BioAlignments v2.3.0 Diff since v2.2.0 Closed issues: Outdated documentation for SAM/BAM in BioAlig...
Adds support for new UK Biobank field 20283 "Resolved plate swaps" and fixes other minor bugs (see N...
What's Changed Enforce using CURIEs for all relationships by @cthoyt in https://github.com/biopragm...
Lot of things in this release. See the documentation especially for htslib support (tested with htsl...
version-1.9 2023-07-20 - fix a problem during parsing (issue #81) - fix a memory leak (issue #82) - ...
version 1.8 07/13/2023 Fix a memory leak in bitonic (issue #77) Merge the unmapped reads, now we h...
version-1.1 2020-06-09 - release the memory bounds when sorting with power of 2 MPI jobs - fix unbal...
version-1.5.1 2021-02-27 - fix some memory leaks - fix trouble when compressing very small buffer - ...
Tool to interconvert between various bioinformatics formats that BioPython support
Tool to interconvert between various bioinformatics formats that BioPython support
Minor release version-1.0.2 BUG FIXES Fix bug when no NBR fragments are found NEW FEATURES add d...
Commits bee68fa: fix setting zSclae from md (Richard Challis) 2c9c7fb: catch bioproject accession i...
Functions for comparing and merging sets of multiple bins are now available. New example data inclu...
Commits 6de5b56: Bump version: 0.5.63 → 0.5.64-dev (GitHub Action) 005a836: Add CURIE parse benchma...
Workaround fix for sam files with no reads causing failure in bamsort. This is likely only to occur...
BioAlignments v2.3.0 Diff since v2.2.0 Closed issues: Outdated documentation for SAM/BAM in BioAlig...
Adds support for new UK Biobank field 20283 "Resolved plate swaps" and fixes other minor bugs (see N...
What's Changed Enforce using CURIEs for all relationships by @cthoyt in https://github.com/biopragm...
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