Supplementary material 1 from: Abarenkov K, Kristiansson E, Ryberg M, Nogal-Prata S, Gómez-Martínez D, Stüer-Patowsky K, Jansson T, Põlme S, Ghobad-Nejhad M, Corcoll N, Scharn R, Sánchez-García M, Khomich M, Wurzbacher C, Nilsson RH (2022) The curse of the uncultured fungus. MycoKeys 86: 177-194. https://doi.org/10.3897/mycokeys.86.76053

Supplementary material 4 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Zero-centred histogram of the residuals between simulated data and predictions of the model with the...

Supplementary material 3 from: Wang HM, Lun YY, Lu Q, Liu HX, Decock C, Zhang XY (2018) Ophiostomatoid fungi associated with pines infected by Bursaphelenchus xylophilus and Monochamus alternatus in China, including three new species. MycoKeys 39: 1-27. https://doi.org/10.3897/mycokeys.39.27014

Wang, HuiMin
Lun, YingYing
Lu, Quan
Liu, HuiXiang
Decock, Cony
Zhang, XingYao

September 2018

Figure S3. Three ML phylogenetic threes based on tub2 after excluding introns

Supplementary material 5 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Zero-centred histogram of the residuals between simulated data and predictions of the model with the...

Supplementary material 3 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Standard curve and its correlation coefficient to determine the limit of detection for the real-time...

Supplementary material 2 from: Wang HM, Lun YY, Lu Q, Liu HX, Decock C, Zhang XY (2018) Ophiostomatoid fungi associated with pines infected by Bursaphelenchus xylophilus and Monochamus alternatus in China, including three new species. MycoKeys 39: 1-27. https://doi.org/10.3897/mycokeys.39.27014

Wang, HuiMin
Lun, YingYing
Lu, Quan
Liu, HuiXiang
Decock, Cony
Zhang, XingYao

September 2018

Figure S2. Phylograms of fungal associates of pine infected by PWN and Monochamusalternatus in China...

Supplementary material 1 from: Shumskaya M, Lorusso N, Patel U, Leigh M, Somervuo P, Schigel D (2023) MycoPins: a metabarcoding-based method to monitor fungal colonization of fine woody debris. MycoKeys 96: 77-95. https://doi.org/10.3897/mycokeys.96.101033

Shumskaya, Maria
Lorusso, Nicholas
Patel, Urvi
Leigh, Madison
Somervuo, Panu
Schigel, Dmitry

March 2023

Sequences of the primers used in the experiment and ITS2 fragment amplified from DNA extracted from ...

Supplementary material 1 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000

Abarenkov, Kessy
Adams, Rachel I.
Laszlo, Irinyi
Agan, Ahto
Ambrosio, Elia
Antonelli, Alexandre
Bahram, Mohammad
Bengtsson-Palme, Johan
Bok, Gunilla
Cangren, Patrik
Coimbra, Victor
Coleine, Claudia
Gustafsson, Claes
He, Jinhong
Hofmann, Tobias
Kristiansson, Erik
Larsson, Ellen
Larsson, Tomas
Liu, Yingkui
Martinsson, Svante
Meyer, Wieland
Panova, Marina
Pombubpa, Nuttapon
Ritter, Camila
Ryberg, Martin
Svantesson, Sten
Scharn, Ruud
Svensson, Ola
Töpel, Mats
Unterseher, Martin
Visagie, Cobus
Wurzbacher, Christian
Taylor, Andy F.S.
Kõljalg, Urmas
Schriml, Lynn
Nilsson, R. Henrik

September 2016

Keywords used to identify fungal sequences from the built environment in the INSDC : Explanati...

Supplementary material 1 from: Wang HM, Lun YY, Lu Q, Liu HX, Decock C, Zhang XY (2018) Ophiostomatoid fungi associated with pines infected by Bursaphelenchus xylophilus and Monochamus alternatus in China, including three new species. MycoKeys 39: 1-27. https://doi.org/10.3897/mycokeys.39.27014

Wang, HuiMin
Lun, YingYing
Lu, Quan
Liu, HuiXiang
Decock, Cony
Zhang, XingYao

September 2018

Figure S1. Phylogram of fungal associates of pine infected by PWN and Monochamusalternatus in China ...

Supplementary material 3 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000

Abarenkov, Kessy
Adams, Rachel I.
Laszlo, Irinyi
Agan, Ahto
Ambrosio, Elia
Antonelli, Alexandre
Bahram, Mohammad
Bengtsson-Palme, Johan
Bok, Gunilla
Cangren, Patrik
Coimbra, Victor
Coleine, Claudia
Gustafsson, Claes
He, Jinhong
Hofmann, Tobias
Kristiansson, Erik
Larsson, Ellen
Larsson, Tomas
Liu, Yingkui
Martinsson, Svante
Meyer, Wieland
Panova, Marina
Pombubpa, Nuttapon
Ritter, Camila
Ryberg, Martin
Svantesson, Sten
Scharn, Ruud
Svensson, Ola
Töpel, Mats
Unterseher, Martin
Visagie, Cobus
Wurzbacher, Christian
Taylor, Andy F.S.
Kõljalg, Urmas
Schriml, Lynn
Nilsson, R. Henrik

September 2016

Krona chart : Explanation note: Interactive Krona chart for visualizing the taxonomic distribu...

Editorial for the special issue: Human pathogenic filamentous fungi from food/water and mycotoxins from water

Paterson, R. R. M.

January 2019

[Excerpt] This special issue was conceived due to the success of the book by Paterson and Lima [1] o...

Supplementary material 2 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Isolates which DNA was extracted and used to confirm the specificity of the primers ccITS2F and SBD3...

Supplementary material 1 from: Rosenblad MA, Martín MP, Tedersoo L, Ryberg M, Larsson E, Wurzbacher C, Abarenkov K, Nilsson RH (2016) Detection of signal recognition particle (SRP) RNAs in the nuclear ribosomal internal transcribed spacer 1 (ITS1) of three lineages of ectomycorrhizal fungi (Agaricomycetes, Basidiomycota). MycoKeys 13: 21-33. https://doi.org/10.3897/mycokeys.13.8579

Alm Rosenblad, Magnus
Martín, María P.
Tedersoo, Leho
Ryberg, Martin K.
Larsson, Ellen
Wurzbacher, Christian
Abarenkov, Kessy
Nilsson, R. Henrik

May 2016

Output from cmsearch and primers used : Explanation note: A) The output from cmsearch showing ...

Supplementary material 2 from: Xu M, Liu Y, Möller E, LaGreca S, Moya P, Wang X, Timdal E, de Boer H, Barreno E, Wang L, Thüs H, Andrésson Ó, Magnússon KP, Ólafsdóttir ES, Heiðmarsson S (2023) Mycobiont-specific primers facilitate the amplification of mitochondrial small subunit ribosomal DNA: a focus on the lichenized fungal genus Melanelia (Ascomycota, Parmeliaceae) in Iceland. MycoKeys 96: 57-75. https://doi.org/10.3897/mycokeys.96.100037

Xu, Maonian
Liu, Yingkui
Möller, Erik
LaGreca, Scott
Moya, Patricia
Wang, Xinyu
Timdal, Einar
de Boer, Hugo
Barreno, Eva
Wang, Lisong
Thüs, Holger
Andrésson, Ólafur
Magnússon, Kristinn Pétur
Ólafsdóttir, Elín Soffia
Heiðmarsson, Starri

March 2023

Priming sites for alternative mtSSU primers, Nanodrop results and in silico PCR amplicon

Supplementary material 8 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Probability of disease report in an area of 40-km to 130-km radius from the sampler as a function of...

Supplementary material 1 from: Joshi A, Lanjekar VB, Dhakephalkar PK, Callaghan TM, Griffith GW, Dagar SS (2018) Liebetanzomyces polymorphus gen. et sp. nov., a new anaerobic fungus (Neocallimastigomycota) isolated from the rumen of a goat. MycoKeys 40: 89-110. https://doi.org/10.3897/mycokeys.40.28337

Joshi, Akshay
Lanjekar, Vikram B.
Dhakephalkar, Prashant K.
Callaghan, Tony M.
Griffith, Gareth W.
Dagar, Sumit Singh

October 2018

Figure S1 : Explanation note: Photographs showing fungal thalli (marked by arrows) of Liebet...

Supplementary material 4 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Zero-centred histogram of the residuals between simulated data and predictions of the model with the...

Supplementary material 3 from: Wang HM, Lun YY, Lu Q, Liu HX, Decock C, Zhang XY (2018) Ophiostomatoid fungi associated with pines infected by Bursaphelenchus xylophilus and Monochamus alternatus in China, including three new species. MycoKeys 39: 1-27. https://doi.org/10.3897/mycokeys.39.27014

Wang, HuiMin
Lun, YingYing
Lu, Quan
Liu, HuiXiang
Decock, Cony
Zhang, XingYao

September 2018

Figure S3. Three ML phylogenetic threes based on tub2 after excluding introns

Supplementary material 5 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Zero-centred histogram of the residuals between simulated data and predictions of the model with the...

Supplementary material 3 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Standard curve and its correlation coefficient to determine the limit of detection for the real-time...

Supplementary material 2 from: Wang HM, Lun YY, Lu Q, Liu HX, Decock C, Zhang XY (2018) Ophiostomatoid fungi associated with pines infected by Bursaphelenchus xylophilus and Monochamus alternatus in China, including three new species. MycoKeys 39: 1-27. https://doi.org/10.3897/mycokeys.39.27014

Wang, HuiMin
Lun, YingYing
Lu, Quan
Liu, HuiXiang
Decock, Cony
Zhang, XingYao

September 2018

Figure S2. Phylograms of fungal associates of pine infected by PWN and Monochamusalternatus in China...

Supplementary material 1 from: Shumskaya M, Lorusso N, Patel U, Leigh M, Somervuo P, Schigel D (2023) MycoPins: a metabarcoding-based method to monitor fungal colonization of fine woody debris. MycoKeys 96: 77-95. https://doi.org/10.3897/mycokeys.96.101033

Shumskaya, Maria
Lorusso, Nicholas
Patel, Urvi
Leigh, Madison
Somervuo, Panu
Schigel, Dmitry

March 2023

Sequences of the primers used in the experiment and ITS2 fragment amplified from DNA extracted from ...

Supplementary material 1 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000

Abarenkov, Kessy
Adams, Rachel I.
Laszlo, Irinyi
Agan, Ahto
Ambrosio, Elia
Antonelli, Alexandre
Bahram, Mohammad
Bengtsson-Palme, Johan
Bok, Gunilla
Cangren, Patrik
Coimbra, Victor
Coleine, Claudia
Gustafsson, Claes
He, Jinhong
Hofmann, Tobias
Kristiansson, Erik
Larsson, Ellen
Larsson, Tomas
Liu, Yingkui
Martinsson, Svante
Meyer, Wieland
Panova, Marina
Pombubpa, Nuttapon
Ritter, Camila
Ryberg, Martin
Svantesson, Sten
Scharn, Ruud
Svensson, Ola
Töpel, Mats
Unterseher, Martin
Visagie, Cobus
Wurzbacher, Christian
Taylor, Andy F.S.
Kõljalg, Urmas
Schriml, Lynn
Nilsson, R. Henrik

September 2016

Keywords used to identify fungal sequences from the built environment in the INSDC : Explanati...

Supplementary material 1 from: Wang HM, Lun YY, Lu Q, Liu HX, Decock C, Zhang XY (2018) Ophiostomatoid fungi associated with pines infected by Bursaphelenchus xylophilus and Monochamus alternatus in China, including three new species. MycoKeys 39: 1-27. https://doi.org/10.3897/mycokeys.39.27014

Wang, HuiMin
Lun, YingYing
Lu, Quan
Liu, HuiXiang
Decock, Cony
Zhang, XingYao

September 2018

Figure S1. Phylogram of fungal associates of pine infected by PWN and Monochamusalternatus in China ...

Supplementary material 3 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000

Abarenkov, Kessy
Adams, Rachel I.
Laszlo, Irinyi
Agan, Ahto
Ambrosio, Elia
Antonelli, Alexandre
Bahram, Mohammad
Bengtsson-Palme, Johan
Bok, Gunilla
Cangren, Patrik
Coimbra, Victor
Coleine, Claudia
Gustafsson, Claes
He, Jinhong
Hofmann, Tobias
Kristiansson, Erik
Larsson, Ellen
Larsson, Tomas
Liu, Yingkui
Martinsson, Svante
Meyer, Wieland
Panova, Marina
Pombubpa, Nuttapon
Ritter, Camila
Ryberg, Martin
Svantesson, Sten
Scharn, Ruud
Svensson, Ola
Töpel, Mats
Unterseher, Martin
Visagie, Cobus
Wurzbacher, Christian
Taylor, Andy F.S.
Kõljalg, Urmas
Schriml, Lynn
Nilsson, R. Henrik

September 2016

Krona chart : Explanation note: Interactive Krona chart for visualizing the taxonomic distribu...

Editorial for the special issue: Human pathogenic filamentous fungi from food/water and mycotoxins from water

Paterson, R. R. M.

January 2019

[Excerpt] This special issue was conceived due to the success of the book by Paterson and Lima [1] o...

Supplementary material 2 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Isolates which DNA was extracted and used to confirm the specificity of the primers ccITS2F and SBD3...

Supplementary material 1 from: Rosenblad MA, Martín MP, Tedersoo L, Ryberg M, Larsson E, Wurzbacher C, Abarenkov K, Nilsson RH (2016) Detection of signal recognition particle (SRP) RNAs in the nuclear ribosomal internal transcribed spacer 1 (ITS1) of three lineages of ectomycorrhizal fungi (Agaricomycetes, Basidiomycota). MycoKeys 13: 21-33. https://doi.org/10.3897/mycokeys.13.8579

Alm Rosenblad, Magnus
Martín, María P.
Tedersoo, Leho
Ryberg, Martin K.
Larsson, Ellen
Wurzbacher, Christian
Abarenkov, Kessy
Nilsson, R. Henrik

May 2016

Output from cmsearch and primers used : Explanation note: A) The output from cmsearch showing ...

Supplementary material 2 from: Xu M, Liu Y, Möller E, LaGreca S, Moya P, Wang X, Timdal E, de Boer H, Barreno E, Wang L, Thüs H, Andrésson Ó, Magnússon KP, Ólafsdóttir ES, Heiðmarsson S (2023) Mycobiont-specific primers facilitate the amplification of mitochondrial small subunit ribosomal DNA: a focus on the lichenized fungal genus Melanelia (Ascomycota, Parmeliaceae) in Iceland. MycoKeys 96: 57-75. https://doi.org/10.3897/mycokeys.96.100037

Xu, Maonian
Liu, Yingkui
Möller, Erik
LaGreca, Scott
Moya, Patricia
Wang, Xinyu
Timdal, Einar
de Boer, Hugo
Barreno, Eva
Wang, Lisong
Thüs, Holger
Andrésson, Ólafur
Magnússon, Kristinn Pétur
Ólafsdóttir, Elín Soffia
Heiðmarsson, Starri

March 2023

Priming sites for alternative mtSSU primers, Nanodrop results and in silico PCR amplicon

Supplementary material 8 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Probability of disease report in an area of 40-km to 130-km radius from the sampler as a function of...

Supplementary material 1 from: Joshi A, Lanjekar VB, Dhakephalkar PK, Callaghan TM, Griffith GW, Dagar SS (2018) Liebetanzomyces polymorphus gen. et sp. nov., a new anaerobic fungus (Neocallimastigomycota) isolated from the rumen of a goat. MycoKeys 40: 89-110. https://doi.org/10.3897/mycokeys.40.28337

Joshi, Akshay
Lanjekar, Vikram B.
Dhakephalkar, Prashant K.
Callaghan, Tony M.
Griffith, Gareth W.
Dagar, Sumit Singh

October 2018

Figure S1 : Explanation note: Photographs showing fungal thalli (marked by arrows) of Liebet...

Supplementary material 4 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Zero-centred histogram of the residuals between simulated data and predictions of the model with the...

Supplementary material 3 from: Wang HM, Lun YY, Lu Q, Liu HX, Decock C, Zhang XY (2018) Ophiostomatoid fungi associated with pines infected by Bursaphelenchus xylophilus and Monochamus alternatus in China, including three new species. MycoKeys 39: 1-27. https://doi.org/10.3897/mycokeys.39.27014

Wang, HuiMin
Lun, YingYing
Lu, Quan
Liu, HuiXiang
Decock, Cony
Zhang, XingYao

September 2018

Figure S3. Three ML phylogenetic threes based on tub2 after excluding introns

Supplementary material 5 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549

Muller, Elodie
Dvořák, Miloň
Marçais, Benoit
Caeiro, Elsa
Clot, Bernard
Desprez-Loustau, Marie-Laure
Gedda, Björn
Lundén, Karl
Migliorini, Duccio
Oliver, Gilles
Ramos, Ana Paula
Rigling, Daniel
Rybníček, Ondřej
Santini, Alberto
Schneider, Salome
Stenlid, Jan
Tedeschini, Emma
Aguayo, Jaime
Gomez-Gallego, Mireia

May 2023

Zero-centred histogram of the residuals between simulated data and predictions of the model with the...

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