Dataset A - Alphafold2 prediction output data for 753 secreted proteins of Rhizophagus irregularis DAOM197198. Gene IDs are taken from the annotation by Yildirir et al. 2021, doi.org/10.1111/nph.17842 Dataset B - Alphafold2 prediction output data for 10 fungal effectors. These are nine effectors from Fusarium oxysporum f. sp. lycopersici and RiSLM from Rhizophagus irregularis as well as their amino acid sequences. Signal peptides and sequences preceding a predicted Kex2 processing site were removed. Dataset C - Alphafold2 prediction output data for 454 matches of a MycFOLD-HMM search across the Mycocosm genome database (https://mycocosm.jgi.doe.gov/mycocosm/home) and 36 Glomeromycotina fungal genomes.This work was funded by the Gatsby Cha...
<p>The pipeline is composed of six major steps delimited by boxes. Step 1 (Secretome prediction) ide...
© 2015 Sperschneider, Williams, Hane, Singh and Taylor. The steadily increasing number of sequenced ...
Background: Large-scale computational prediction of protein structures represents a cost-effective a...
Datasets for: "Computational structural genomics unravels common folds and predicted functions in t...
Structural biology has the potential to illuminate the evolution of pathogen effectors and their com...
BACKGROUND: The ecological niche occupied by a fungal species, its pathogenicity and its usefulness ...
<div><p>The Dothideomycete fungus <em>Mycosphaerella graminicola</em> is the causal agent of Septori...
Oomycete and fungal interactions with plants can be neutral, symbiotic or pathogenic with different ...
Datasets for: "Comparative computational structural genomics highlights divergent evolution of fung...
Tables Table S1. List of fungal genomes analyzed in this work, associated references and properties...
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell to faci...
Arbuscular mycorrhizal (AM) fungi are able to colonize more than 80% of all land plants, providing s...
Abstract Background Stagonospora nodorum, a fungal ascomycete in the class dothideomycetes, is a dam...
Abstract Background Gray leaf spot is a devastating disease caused by Stemphylium lycopersici that t...
Protein sequence features are explored in relation to the production of over-expressed extracellular...
<p>The pipeline is composed of six major steps delimited by boxes. Step 1 (Secretome prediction) ide...
© 2015 Sperschneider, Williams, Hane, Singh and Taylor. The steadily increasing number of sequenced ...
Background: Large-scale computational prediction of protein structures represents a cost-effective a...
Datasets for: "Computational structural genomics unravels common folds and predicted functions in t...
Structural biology has the potential to illuminate the evolution of pathogen effectors and their com...
BACKGROUND: The ecological niche occupied by a fungal species, its pathogenicity and its usefulness ...
<div><p>The Dothideomycete fungus <em>Mycosphaerella graminicola</em> is the causal agent of Septori...
Oomycete and fungal interactions with plants can be neutral, symbiotic or pathogenic with different ...
Datasets for: "Comparative computational structural genomics highlights divergent evolution of fung...
Tables Table S1. List of fungal genomes analyzed in this work, associated references and properties...
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell to faci...
Arbuscular mycorrhizal (AM) fungi are able to colonize more than 80% of all land plants, providing s...
Abstract Background Stagonospora nodorum, a fungal ascomycete in the class dothideomycetes, is a dam...
Abstract Background Gray leaf spot is a devastating disease caused by Stemphylium lycopersici that t...
Protein sequence features are explored in relation to the production of over-expressed extracellular...
<p>The pipeline is composed of six major steps delimited by boxes. Step 1 (Secretome prediction) ide...
© 2015 Sperschneider, Williams, Hane, Singh and Taylor. The steadily increasing number of sequenced ...
Background: Large-scale computational prediction of protein structures represents a cost-effective a...