grunwaldlab/poppr: Poppr version 2.8.6

poppr 2.8.6 BUG FIX read.genalex() now can import columns with entirely "T" alleles as "T" instead of "TRUE". (See https://github.com/grunwaldlab/poppr/issues/214 for details, thanks to @planteering for pointing it out). NEW IMPORTS Progress bars are now implemented via the {progressr} package, which gives the user control over what should be displayed (or not). For example, to get auditory updates instead of a progress bar, you can use the "beepr" package and set progressr::handlers("beepr"). This will play an alert for each step (~50) and a final sound. To suppress all progress bars entirely, you can use progressr::handlers("void"). These progress bars have replaced the utils::txtProgressBar() and dplyr::progress_estimated() bars. Here's a fun demonstration of how you can customize poppr's progress bars, which you can read more about in the {progressr} documentation if (!require("progress")) install.packages("progress") library("poppr") data(Pinf) library("progressr") handlers( handler_progress( format = ":spin :current/:total [:bar] :percent in :elapsed ETA: :eta", complete = "^", incomplete = "_", current = "", clear = FALSE ) ) ia(Pinf, sample = 399, plot = FALSE