Publication date
January 2017
DOIAbstract
Fixed the error of post-modification of transcript detection. Updated the code to fit the Vienna RNA package version 2.3.
Fixed the error of post-modification of transcript detection. Updated the code to fit the Vienna RNA package version 2.3.
Fix the bug which generating a wrong headers of riboswitch and RNA thermometer output table.If you u...
Add the module for parsing the IDs containing underline for sRNA target prediction. Fix the error fo...
fix the error of annotation transfer due to the wrong path of the embl folder adapt sRNA target pred...
fix merging transcript of dRNA and fragmented RNA. fix terminator overlaps with genes
Fix a bug for UTR detection - the same starting point and end point between CDS and transcript
Fix the error of checking overlapping regions for sRNA detection. Update licence
ANNOgesic - The pipeline for bacterial/archaeal RNA-Seq based genome annotations
Add a bug checking program for sRNA detection. Add a cutoff of bit score of Blast for sRNA detection
Fix the error of using TSS file which is not from ANNOgesic for predicting sRNAs. Add code for check...
add the statement for checking IntaRNA results and remove the lines which missing the required infor...
About ANNOgesic ANNOgesic is a modular, command-line tool that can integrated different types of RN...
Fix the error of checking overlap TSSs for multiple accession numbers. Fix the error of parameter ty...
ANNOgesic - A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genome
fix the problem which conflict in root folder. fix the error of annotation transfer
fix the error of type matching for sRNA overlap checking, assign to float exclude the ID checking fo...
Fix the bug which generating a wrong headers of riboswitch and RNA thermometer output table.If you u...
Add the module for parsing the IDs containing underline for sRNA target prediction. Fix the error fo...
fix the error of annotation transfer due to the wrong path of the embl folder adapt sRNA target pred...
fix merging transcript of dRNA and fragmented RNA. fix terminator overlaps with genes
Fix a bug for UTR detection - the same starting point and end point between CDS and transcript
Fix the error of checking overlapping regions for sRNA detection. Update licence
ANNOgesic - The pipeline for bacterial/archaeal RNA-Seq based genome annotations
Add a bug checking program for sRNA detection. Add a cutoff of bit score of Blast for sRNA detection
Fix the error of using TSS file which is not from ANNOgesic for predicting sRNAs. Add code for check...
add the statement for checking IntaRNA results and remove the lines which missing the required infor...
About ANNOgesic ANNOgesic is a modular, command-line tool that can integrated different types of RN...
Fix the error of checking overlap TSSs for multiple accession numbers. Fix the error of parameter ty...
ANNOgesic - A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genome
fix the problem which conflict in root folder. fix the error of annotation transfer
fix the error of type matching for sRNA overlap checking, assign to float exclude the ID checking fo...
Fix the bug which generating a wrong headers of riboswitch and RNA thermometer output table.If you u...
Add the module for parsing the IDs containing underline for sRNA target prediction. Fix the error fo...
fix the error of annotation transfer due to the wrong path of the embl folder adapt sRNA target pred...
Add to ORKG