What's Changed Feature changes task alignment_metrics: more resilient to large amplicon designs by @dpark01 in #435 Docker image updates update nextclade and vadr docker images by @dpark01 in #433 bump pangolin to 4.1.2-1.14 and nextclade to 2.5.0 by @dpark01 in #434 Full Changelog: https://github.com/broadinstitute/viral-pipelines/compare/v2.1.33.13...v2.1.33.1
What's Changed Minor functional updates CDC contractual updates to sarscov2_illumina_full (min cove...
new features: most task runtime blocks now support cromwell auto memory scaling/retry automated dat...
new features: new workflow sarscov2_nextstrain [#204, #208, #219] updates to genbank submission [#2...
What's Changed Feature changes task alignment_metrics: more resilient to large amplicon designs by ...
What's Changed update pangolin and nextclade docker images by @dpark01 in #409 Full Changelog: htt...
What's Changed functionality changes and bug fixes Convert amplicon16S_analysis workflow (QIIME) fr...
What's Changed Feature changes CDC SC2 viral pipeline updates (parameters, reporting, QC) by @dpark...
What's Changed docker image updates nextclade 1.7.0 to 1.10.0 by @dpark01 in #404 pangolin containe...
What's Changed new features robustness: allow one retry for gisaid uploader [#395] optimizations ...
What's Changed new and changed workflows Add workflow for QIIME2 classification of 16S reads by @go...
What's Changed new features / behavior new read_depths workflow by @lakras in #393 tsv_join task: a...
What's Changed incorporate assemble_refbased as refine/polish for denovo by @dpark01 in #422 new me...
What's Changed sc2 sequencing report ram and pangolin update fault tolerance by @dpark01 in #410 pa...
What's Changed lofreq task portability, misc other edits by @dpark01 in #426 Full Changelog: https...
What's Changed new features turn on allowNestedInputs for subworkflows: this exposes to the end-use...
What's Changed Minor functional updates CDC contractual updates to sarscov2_illumina_full (min cove...
new features: most task runtime blocks now support cromwell auto memory scaling/retry automated dat...
new features: new workflow sarscov2_nextstrain [#204, #208, #219] updates to genbank submission [#2...
What's Changed Feature changes task alignment_metrics: more resilient to large amplicon designs by ...
What's Changed update pangolin and nextclade docker images by @dpark01 in #409 Full Changelog: htt...
What's Changed functionality changes and bug fixes Convert amplicon16S_analysis workflow (QIIME) fr...
What's Changed Feature changes CDC SC2 viral pipeline updates (parameters, reporting, QC) by @dpark...
What's Changed docker image updates nextclade 1.7.0 to 1.10.0 by @dpark01 in #404 pangolin containe...
What's Changed new features robustness: allow one retry for gisaid uploader [#395] optimizations ...
What's Changed new and changed workflows Add workflow for QIIME2 classification of 16S reads by @go...
What's Changed new features / behavior new read_depths workflow by @lakras in #393 tsv_join task: a...
What's Changed incorporate assemble_refbased as refine/polish for denovo by @dpark01 in #422 new me...
What's Changed sc2 sequencing report ram and pangolin update fault tolerance by @dpark01 in #410 pa...
What's Changed lofreq task portability, misc other edits by @dpark01 in #426 Full Changelog: https...
What's Changed new features turn on allowNestedInputs for subworkflows: this exposes to the end-use...
What's Changed Minor functional updates CDC contractual updates to sarscov2_illumina_full (min cove...
new features: most task runtime blocks now support cromwell auto memory scaling/retry automated dat...
new features: new workflow sarscov2_nextstrain [#204, #208, #219] updates to genbank submission [#2...