Supplementary material 3 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Figure 5 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2017

Figure 5 - Gel image of high quality DNA (Vitaceae, ex J. Wen). DNA bands are tightly conce...

Specimen Identifiers: Linking tissues, DNA samples, and sequence data to voucher specimens in publicly accessible databases

Mulcahy, Daniel

September 2022

Nearly all disciplines of biology now have some form of molecular genetic analyses incorporated into...

Supplementary material 3 from: Chapman AD, Belbin L, Zermoglio PF, Wieczorek J, Morris PJ, Nicholls M, Rees ER, Veiga AK, Thompson A, Saraiva AM, James SA, Gendreau C, Benson A, Schigel D (2020) Developing Standards for Improved Data Quality and for Selecting Fit for Use Biodiversity Data. Biodiversity Information Science and Standards 4: e50889. https://doi.org/10.3897/biss.4.50889

Chapman, Arthur
Belbin, Lee
Zermoglio, Paula
Wieczorek, John
Morris, Paul
Nicholls, Miles
Rees, Emily Rose
Veiga, Allan
Thompson, Alexander
Saraiva, Antonio
James, Shelley
Gendreau, Christian
Benson, Abigail
Schigel, Dmitry

March 2020

Counts of occurrence records in 2019-04-15 snapshot of GBIF-mediated data that fit the three categor...

Supplementary material 2 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2018

Example collecting sheet (from the GGI–Gardens project)showing preferred data entry fields included ...

Supplementary material 1 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2018

Two lists of articles discussing various herbarium procedures and collecting technique

Supplementary material 4 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2018

Provenance for Garden Plants: Original Collection Information found on voucher label or from Garden ...

Figure 4c from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2017

Figure 4c - The physical relationships among samples (doi for all figures 10.6084/m9.figsha...

Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices

Vicki Funk
Morgan Gostel
Amanda Devine
Carol Kelloff
Kenneth Wurdack
Chris Tuccinardi
Aleks Radosavljevic
Melinda Peters
Jonathan Coddington

January 2017

The introduction of Next Generation Sequencing into the disciplines of plant systematics, ecology, a...

Figure 3 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2017

Figure 3 - Example voucher specimen collection event with all necessary materials (from GGI...

Supplementary material 3 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

This spreadsheet contains the original identifications of specimens shipped to Trevor Goward for ide...

Supplementary material 1 from: Zúñiga JD, Gostel MR, Mulcahy DG, Barker K, Hill A, Sedaghatpour M, Vo SQ, Funk VA, Coddington JA (2017) Data Release: DNA barcodes of plant species collected for the Global Genome Initiative for Gardens Program, National Museum of Natural History, Smithsonian Institution. PhytoKeys 88: 119-122. https://doi.org/10.3897/phytokeys.88.14607

Zúñiga, Jose D.
Gostel, Morgan R.
Mulcahy, Daniel G.
Barker, Katharine
Hill, Asia
Sedaghatpour, Maryam
Vo, Samantha Q.
Funk, Vicki A.
Coddington, Jonathan A.

January 2018

List of samples collected for the Global Genome Initiative for Gardens project selected for DNA barc...

Supplementary material 2 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

These are the DNA extraction methods that were provided by RTL Genomics used for sweep-net samples o...

Best practices for connecting genetic records with specimen data

Trizna, Michael

July 2018

As rapid advances in sequencing technology result in more branches of the tree of life being illumin...

Supplementary material 9 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

This is the derived dataset created for the purpose of analysis. It includes only species-resolution...

Supplementary material 8 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

BOLD TaxonID Tree for SlikokOtu1170 generated by BOLD's Identification Engine, 26.December.201

Figure 5 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2017

Figure 5 - Gel image of high quality DNA (Vitaceae, ex J. Wen). DNA bands are tightly conce...

Specimen Identifiers: Linking tissues, DNA samples, and sequence data to voucher specimens in publicly accessible databases

Mulcahy, Daniel

September 2022

Nearly all disciplines of biology now have some form of molecular genetic analyses incorporated into...

Supplementary material 3 from: Chapman AD, Belbin L, Zermoglio PF, Wieczorek J, Morris PJ, Nicholls M, Rees ER, Veiga AK, Thompson A, Saraiva AM, James SA, Gendreau C, Benson A, Schigel D (2020) Developing Standards for Improved Data Quality and for Selecting Fit for Use Biodiversity Data. Biodiversity Information Science and Standards 4: e50889. https://doi.org/10.3897/biss.4.50889

Chapman, Arthur
Belbin, Lee
Zermoglio, Paula
Wieczorek, John
Morris, Paul
Nicholls, Miles
Rees, Emily Rose
Veiga, Allan
Thompson, Alexander
Saraiva, Antonio
James, Shelley
Gendreau, Christian
Benson, Abigail
Schigel, Dmitry

March 2020

Counts of occurrence records in 2019-04-15 snapshot of GBIF-mediated data that fit the three categor...

Supplementary material 2 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2018

Example collecting sheet (from the GGI–Gardens project)showing preferred data entry fields included ...

Supplementary material 1 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2018

Two lists of articles discussing various herbarium procedures and collecting technique

Supplementary material 4 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2018

Provenance for Garden Plants: Original Collection Information found on voucher label or from Garden ...

Figure 4c from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2017

Figure 4c - The physical relationships among samples (doi for all figures 10.6084/m9.figsha...

Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices

Vicki Funk
Morgan Gostel
Amanda Devine
Carol Kelloff
Kenneth Wurdack
Chris Tuccinardi
Aleks Radosavljevic
Melinda Peters
Jonathan Coddington

January 2017

The introduction of Next Generation Sequencing into the disciplines of plant systematics, ecology, a...

Figure 3 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2017

Figure 3 - Example voucher specimen collection event with all necessary materials (from GGI...

Supplementary material 3 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

This spreadsheet contains the original identifications of specimens shipped to Trevor Goward for ide...

Supplementary material 1 from: Zúñiga JD, Gostel MR, Mulcahy DG, Barker K, Hill A, Sedaghatpour M, Vo SQ, Funk VA, Coddington JA (2017) Data Release: DNA barcodes of plant species collected for the Global Genome Initiative for Gardens Program, National Museum of Natural History, Smithsonian Institution. PhytoKeys 88: 119-122. https://doi.org/10.3897/phytokeys.88.14607

Zúñiga, Jose D.
Gostel, Morgan R.
Mulcahy, Daniel G.
Barker, Katharine
Hill, Asia
Sedaghatpour, Maryam
Vo, Samantha Q.
Funk, Vicki A.
Coddington, Jonathan A.

January 2018

List of samples collected for the Global Genome Initiative for Gardens project selected for DNA barc...

Supplementary material 2 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

These are the DNA extraction methods that were provided by RTL Genomics used for sweep-net samples o...

Best practices for connecting genetic records with specimen data

Trizna, Michael

July 2018

As rapid advances in sequencing technology result in more branches of the tree of life being illumin...

Supplementary material 9 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

This is the derived dataset created for the purpose of analysis. It includes only species-resolution...

Supplementary material 8 from: Bowser ML, Brassfield R, Dziergowski A, Eskelin T, Hester J, Magness DR, McInnis M, Melvin T, Morton JM, Stone J (2020) Towards conserving natural diversity: A biotic inventory by observations, specimens, DNA barcoding and high-throughput sequencing methods. Biodiversity Data Journal 8: e50124. https://doi.org/10.3897/BDJ.8.e50124

Bowser, Matthew
Brassfield, Rebekah
Dziergowski, Annie
Eskelin, Todd
Hester, Jennifer
Magness, Dawn
McInnis, Mariah
Melvin, Tracy
Morton, John
Stone, Joel

March 2020

BOLD TaxonID Tree for SlikokOtu1170 generated by BOLD's Identification Engine, 26.December.201

Figure 5 from: Funk V, Gostel M, Devine A, Kelloff C, Wurdack K, Tuccinardi C, Radosavljevic A, Peters M, Coddington J (2017) Guidelines for collecting vouchers and tissues intended for genomic work (Smithsonian Institution): Botany Best Practices. Biodiversity Data Journal 5: e11625. https://doi.org/10.3897/BDJ.5.e11625

Funk, Vicki
Gostel, Morgan
Devine, Amanda
Kelloff, Carol
Wurdack, Kenneth
Tuccinardi, Chris
Radosavljevic, Aleks
Peters, Melinda
Coddington, Jonathan

January 2017

Figure 5 - Gel image of high quality DNA (Vitaceae, ex J. Wen). DNA bands are tightly conce...

Specimen Identifiers: Linking tissues, DNA samples, and sequence data to voucher specimens in publicly accessible databases

Mulcahy, Daniel

September 2022

Nearly all disciplines of biology now have some form of molecular genetic analyses incorporated into...

Supplementary material 3 from: Chapman AD, Belbin L, Zermoglio PF, Wieczorek J, Morris PJ, Nicholls M, Rees ER, Veiga AK, Thompson A, Saraiva AM, James SA, Gendreau C, Benson A, Schigel D (2020) Developing Standards for Improved Data Quality and for Selecting Fit for Use Biodiversity Data. Biodiversity Information Science and Standards 4: e50889. https://doi.org/10.3897/biss.4.50889

Chapman, Arthur
Belbin, Lee
Zermoglio, Paula
Wieczorek, John
Morris, Paul
Nicholls, Miles
Rees, Emily Rose
Veiga, Allan
Thompson, Alexander
Saraiva, Antonio
James, Shelley
Gendreau, Christian
Benson, Abigail
Schigel, Dmitry

March 2020

Counts of occurrence records in 2019-04-15 snapshot of GBIF-mediated data that fit the three categor...

Abstract

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Abstract

Extracted data

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