Publication date
April 2021
DOIAbstract
Data and code accompanying the manuscript "Benchmarking microbiome transformations favors quantitative experimental approaches to address compositionality and sampling depth biases"
Data and code accompanying the manuscript "Benchmarking microbiome transformations favors quantitative experimental approaches to address compositionality and sampling depth biases"
Funder: Quadram Institute Bioscience BBSRC Strategic Programme: Microbes in the Food Chain; Grant(s)...
<p>Panel A shows a boxplot of the percentage of total reads reclassified as different genera for all...
<p>The nine genera comprising the mock community are marked in black italics, while the starred gene...
While metagenomic sequencing has become the tool of preference to study host-associated microbial co...
Input and output files of the application of our MDPbiomeGEM system (available at https://github.com...
Although metagenomic sequencing is now the preferred technique to study microbiome-host interactions...
Although metagenomic sequencing is now the preferred technique to study microbiome-host interactions...
The central aims of many host or environmental microbiome studies are to elucidate factors associate...
1. Microbiome sequencing data often need to be normalized due to differences in read depths, and rec...
Thesis (Ph.D.)--University of Washington, 2022The human microbiome consists of trillions of bacteria...
Natural microbial communities are composed of a large diversity of interacting microorganisms, each ...
The investigation of microbial community dynamics is hampered by low resolution, a lack of control, ...
The last few years have seen the advancement of high-throughput experimental techniques that have pr...
1. Microbiome sequencing data often need to be normalized due to differences in read depths, and rec...
Metatranscriptome simulations of Microbiome samples. Simulations are designed to create challenging ...
Funder: Quadram Institute Bioscience BBSRC Strategic Programme: Microbes in the Food Chain; Grant(s)...
<p>Panel A shows a boxplot of the percentage of total reads reclassified as different genera for all...
<p>The nine genera comprising the mock community are marked in black italics, while the starred gene...
While metagenomic sequencing has become the tool of preference to study host-associated microbial co...
Input and output files of the application of our MDPbiomeGEM system (available at https://github.com...
Although metagenomic sequencing is now the preferred technique to study microbiome-host interactions...
Although metagenomic sequencing is now the preferred technique to study microbiome-host interactions...
The central aims of many host or environmental microbiome studies are to elucidate factors associate...
1. Microbiome sequencing data often need to be normalized due to differences in read depths, and rec...
Thesis (Ph.D.)--University of Washington, 2022The human microbiome consists of trillions of bacteria...
Natural microbial communities are composed of a large diversity of interacting microorganisms, each ...
The investigation of microbial community dynamics is hampered by low resolution, a lack of control, ...
The last few years have seen the advancement of high-throughput experimental techniques that have pr...
1. Microbiome sequencing data often need to be normalized due to differences in read depths, and rec...
Metatranscriptome simulations of Microbiome samples. Simulations are designed to create challenging ...
Funder: Quadram Institute Bioscience BBSRC Strategic Programme: Microbes in the Food Chain; Grant(s)...
<p>Panel A shows a boxplot of the percentage of total reads reclassified as different genera for all...
<p>The nine genera comprising the mock community are marked in black italics, while the starred gene...
Add to ORKG