New features Support Python 3.9 (this required bumping the h5py requirement to >= 3.0). Added refine_lines_centroid() for refining lines detected by the kymotracking algorithm. See kymotracking for more information. Added Kymo.plot_with_force() for plotting a kymograph and corresponding force channel downsampled to the same time ranges of the scan lines. Added Kymo.plot_with_position_histogram() and Kymo.plot_with_time_histogram() for plotting a kymograph and corresponding histogram along selected axis. Added KymoLineGroup.save() for saving tracked Kymograph traces to a file. See kymotracking for more information. Allow nbAgg backend to be used for interactive plots in Jupyter notebooks (i.e. %matplotlib notebook). Note that this backend d...
New features Added support for axial force detection (i.e. force detection along the Z axis). The h...
New features Added GaussianMixtureModel to fit a Gaussian Mixture Model to channel data. For more i...
New features Added KymoTrackGroup.ensemble_diffusion() for estimating an average diffusion constant...
New features Added links to example data for all tutorials. Try running them in a jupyter notebook!...
Important notice: This release contains an important fix that could lead to timestamp corruption whe...
Pylake v0.9 provides several new features. Starting from pylake v0.9, the kymotracker will handle un...
This Python package includes data analysis tools for Bluelake HDF5 data. For more information, see ...
New features Added support for Python 3.10. Added CorrelatedStack.define_tether() which can be used...
New features Added possibility to access property sample_rate for TimeSeries data with constant sam...
New features Added covariance-based estimator (cve) option to KymoTrack.estimate_diffusion(). See k...
New features Added Scan.pixel_time_seconds and Kymo.pixel_time_seconds to obtain the pixel dwell ti...
New features Support negating channels (e.g. neg_force = - file.force1x). See files and channels fo...
New features Enabled adding KymoTrackGroup instances with tracks from different source kymographs. ...
New features Added widget to graphically slice FdCurve by distance in Jupyter Notebooks. It can be ...
New features Added widget to graphically slice FdCurve by distance in Jupyter Notebooks. It can be ...
New features Added support for axial force detection (i.e. force detection along the Z axis). The h...
New features Added GaussianMixtureModel to fit a Gaussian Mixture Model to channel data. For more i...
New features Added KymoTrackGroup.ensemble_diffusion() for estimating an average diffusion constant...
New features Added links to example data for all tutorials. Try running them in a jupyter notebook!...
Important notice: This release contains an important fix that could lead to timestamp corruption whe...
Pylake v0.9 provides several new features. Starting from pylake v0.9, the kymotracker will handle un...
This Python package includes data analysis tools for Bluelake HDF5 data. For more information, see ...
New features Added support for Python 3.10. Added CorrelatedStack.define_tether() which can be used...
New features Added possibility to access property sample_rate for TimeSeries data with constant sam...
New features Added covariance-based estimator (cve) option to KymoTrack.estimate_diffusion(). See k...
New features Added Scan.pixel_time_seconds and Kymo.pixel_time_seconds to obtain the pixel dwell ti...
New features Support negating channels (e.g. neg_force = - file.force1x). See files and channels fo...
New features Enabled adding KymoTrackGroup instances with tracks from different source kymographs. ...
New features Added widget to graphically slice FdCurve by distance in Jupyter Notebooks. It can be ...
New features Added widget to graphically slice FdCurve by distance in Jupyter Notebooks. It can be ...
New features Added support for axial force detection (i.e. force detection along the Z axis). The h...
New features Added GaussianMixtureModel to fit a Gaussian Mixture Model to channel data. For more i...
New features Added KymoTrackGroup.ensemble_diffusion() for estimating an average diffusion constant...