POPC lipid membrane, 303K, Charmm36 force field, simulation files and 200 ns trajectory for for openMM simulation engine v7 The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui.org/) online tool. [1] All runs were performed with openMM simulation engine v7 and CHARMM36 additive force field parameters obtained from CHARMM-GUI input files [1]. Conditions: T=303, 128 POPC molecules, 5120 tip3p waters, 200ns trajectory (preceded with equilibration). Note that the provided trajectories are in Gromacs XTC format, whereas NAMD DCD format was generated by openMM. This required trajectory conversion using Gromacs package (v5.1.2) with binary topology file from https://doi.org/10.5281/zenodo.153944 The...
All runs were performed with GROMACS simulation engine v5 and CHARMM36 additive force field paramete...
<p>Equilibrated POPC lipid bilayer simulation ran with Gromacs 4.5, CHARMM36 force field (dx.doi.org...
MD simulation trajectory and related files for fully hydrated POPC bilayer run with Verlet and Group...
<p>POPC lipid membrane, 303K, Charmm36 force field, simulation files and 200 ns trajectory for for o...
POPC lipid membrane, 303K, Charmm36 force field, simulation files and 200 ns trajectory for Gromacs ...
The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui.org...
<p>The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui....
<p>The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui....
The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui.org...
The starting structure was constructed using the CHARMM-GUI Membrane Builder (http://www.charmm-gui....
<p>The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui....
The starting structure was constructed using the CHARMM-GUI Membrane Builder (http://www.charmm-gui....
The starting structure was constructed using the CHARMM-GUI Membrane Builder (http://www.charmm-gui....
All runs were performed with openMM simulation engine v7 and CHARMM36 additive force field paramete...
All runs were performed with openMM simulation engine v7 and CHARMM36 additive force field paramete...
All runs were performed with GROMACS simulation engine v5 and CHARMM36 additive force field paramete...
<p>Equilibrated POPC lipid bilayer simulation ran with Gromacs 4.5, CHARMM36 force field (dx.doi.org...
MD simulation trajectory and related files for fully hydrated POPC bilayer run with Verlet and Group...
<p>POPC lipid membrane, 303K, Charmm36 force field, simulation files and 200 ns trajectory for for o...
POPC lipid membrane, 303K, Charmm36 force field, simulation files and 200 ns trajectory for Gromacs ...
The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui.org...
<p>The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui....
<p>The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui....
The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui.org...
The starting structure was constructed using the CHARMM-GUI Membrane Builder (http://www.charmm-gui....
<p>The starting structure was obtained from CHARMM-GUI Membrane Builder v1.7 (http://www.charmm-gui....
The starting structure was constructed using the CHARMM-GUI Membrane Builder (http://www.charmm-gui....
The starting structure was constructed using the CHARMM-GUI Membrane Builder (http://www.charmm-gui....
All runs were performed with openMM simulation engine v7 and CHARMM36 additive force field paramete...
All runs were performed with openMM simulation engine v7 and CHARMM36 additive force field paramete...
All runs were performed with GROMACS simulation engine v5 and CHARMM36 additive force field paramete...
<p>Equilibrated POPC lipid bilayer simulation ran with Gromacs 4.5, CHARMM36 force field (dx.doi.org...
MD simulation trajectory and related files for fully hydrated POPC bilayer run with Verlet and Group...