Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq

Elisabeth Rebboah
Fairlie Reese
Katherine Williams
Gabriela Balderrama-Gutierrez
Cassandra McGill
Diane Trout
Isaryhia Rodriguez
Heidi Liang
Barbara Wold
Ali Mortazavi

Publication date

April 2021

DOI

10.5281/zenodo.4720584

Abstract

These data make up the UCSC Genome Browser track hub used in our publication. These 36 files include: snATAC-seq pseudobulk peaks across 18 clusters (bigwigs) Merged psuedobulk snATAC-seq peaks across all clusters (bigBeg) TSS regions called from LR-Split-seq (bigBed) ENCODE cCREs (bigBed) LR-Split-seq reads across 7 clusters, used to call TSSs (bams and bam indices) Comprehensive set of GENCODE vM21 (bigBed

Extracted data

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Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq

Abstract

Extracted data

Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq

Abstract

Extracted data

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